RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TACR1P25103 407 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 CNR2P34972 360 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 NOP2P46087 812 aaKnown RBP2.41□□□□□ -2.02
UBXN4-207ENST00000471246 CASP7P55210 303 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 CORO7P57737 925 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 YBX1P67809 324 aaKnown RBP2.41□□□□□ -2.02
UBXN4-207ENST00000471246 AMPD2Q01433 879 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 MVKQ03426 396 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 TMEM62Q0P6H9 643 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 GRB10Q13322 594 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 RAB3GAP1Q15042 981 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 DPY19L1Q2PZI1 675 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 RCSD1Q6JBY9 416 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 KIAA1211LQ6NV74 962 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 RPTNQ6XPR3 784 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 BHLHA9Q7RTU4 235 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 TMC6Q7Z403 805 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 ADAT2Q7Z6V5 191 aaKnown RBP2.41□□□□□ -2.02
UBXN4-207ENST00000471246 SAMD11Q96NU1 681 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 TINF2Q9BSI4 451 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 USP40Q9NVE5 1235 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 KLHL14Q9P2G3 628 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 DIS3Q9Y2L1 958 aaKnown RBP2.41□□□□□ -2.02
UBXN4-207ENST00000471246 BACE2Q9Y5Z0 518 aa2.41□□□□□ -2.02
UBXN4-207ENST00000471246 ANKRD34BA5PLL1 514 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 B2RBV5 119 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 ABLIM1O14639 778 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 SMAD7O15105 426 aaKnown RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 SRGAP3O43295 1099 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 VAMP4O75379 141 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 TBC1D8O95759 1140 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 AMHP03971 560 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 SSBP05455 408 aaKnown RBP eCLIP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 DBHP09172 617 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 FGRP09769 529 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 NAT2P11245 290 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 L1CAMP32004 1257 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 SEPHS1P49903 392 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 NANOS3P60323 173 aaKnown RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 TGFB2P61812 414 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 ZNF200P98182 395 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 EEF1DP3Q658K8 133 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 LARP1BQ659C4 914 aaKnown RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 BICRALQ6AI39 1079 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 IGDCC3Q8IVU1 814 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 ARHGEF39Q8N4T4 335 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 ZNF513Q8N8E2 541 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 MZB1Q8WU39 189 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 DDX1Q92499 740 aaKnown RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 DVL3Q92997 716 aaPredicted RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 RCC1LQ96I51 464 aaKnown RBP2.4□□□□□ -2.03
UBXN4-207ENST00000471246 PDLIM7Q9NR12 457 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 ACTR10Q9NZ32 417 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 MRVI1Q9Y6F6 885 aa2.4□□□□□ -2.03
UBXN4-207ENST00000471246 A0A1W2PQJ5 194 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 C2orf71A6NGG8 1288 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 KCNH1O95259 989 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 CYBBP04839 570 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 PAMP19021 973 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 MAPKAPK2P49137 400 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 RBM25P49756 843 aaKnown RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 ZNF143P52747 638 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 KRTAP10-6P60371 365 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 SCRN1Q12765 414 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 GNL2Q13823 731 aaKnown RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 CBX2Q14781 532 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 NR1I3Q14994 352 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 NCAPHQ15003 741 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 TNNI3KQ59H18 835 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 ZC3H14Q6PJT7 736 aaKnown RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 PAQR3Q6TCH7 311 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 C6orf15Q6UXA7 325 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 LDHDQ86WU2 507 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 TRIM59Q8IWR1 403 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 ADGRG2Q8IZP9 1017 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 CRACR2BQ8N4Y2 399 aaPredicted RBP2.39□□□□□ -2.03
UBXN4-207ENST00000471246 PPP1R14AQ96A00 147 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.39□□□□□ -2.037e-7■■□□□ 12.4
UBXN4-207ENST00000471246 LGR4Q9BXB1 951 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 FBLN5Q9UBX5 448 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 PRKAG3Q9UGI9 489 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 PLA2G2DQ9UNK4 145 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 AKT3Q9Y243 479 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 EMC9Q9Y3B6 208 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 RWDD3Q9Y3V2 267 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 PCDHA5Q9Y5H7 936 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 HCFC2Q9Y5Z7 792 aa2.39□□□□□ -2.03
UBXN4-207ENST00000471246 TRBV23OR9-2A0A075B6M9 112 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 NPHP3-ACAD11A0A0J9YXS1 232 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 A0A1B0GTL3 188 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 TBX1O43435 398 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 SUSD5O60279 629 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 BUB1BO60566 1050 aaPredicted RBP2.38□□□□□ -2.03
UBXN4-207ENST00000471246 THBDP07204 575 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 GLI4P10075 376 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 DNAJA1P31689 397 aaKnown RBP2.38□□□□□ -2.03
UBXN4-207ENST00000471246 IL12RB1P42701 662 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 LIMS1P48059 325 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 NCKAP1LP55160 1127 aa2.38□□□□□ -2.03
UBXN4-207ENST00000471246 KRTAP10-11P60412 298 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms