RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 SLF1Q9BQI6 1058 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 E9PSI1 815 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 ZBED4O75132 1171 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 CYP7A1P22680 504 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 GABPAQ06546 454 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 TFCP2Q12800 502 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 COL9A3Q14050 684 aaPredicted RBP15.3■□□□□ 0.04
UBR4-210ENST00000466969 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 TAPT1Q6NXT6 567 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 DCLK2Q8N568 766 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 CCER1Q8TC90 406 aaPredicted RBP15.3■□□□□ 0.04
UBR4-210ENST00000466969 SNRKQ9NRH2 765 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 SORCS3Q9UPU3 1222 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 SCN10AQ9Y5Y9 1956 aa15.3■□□□□ 0.04
UBR4-210ENST00000466969 ATG2AQ2TAZ0 1938 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 C5orf67F2Z3F1 127 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 ATP2A1O14983 1001 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 KPNA6O60684 536 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 IGSF3O75054 1194 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 DUSP28Q4G0W2 176 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 EFHBQ8N7U6 833 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 FLCNQ8NFG4 579 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 COPRSQ9NQ92 184 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 ASPMQ8IZT6 3477 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
UBR4-210ENST00000466969 RAD50Q92878 1312 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 LGR5O75473 907 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 UPP2O95045 317 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 CKBP12277 381 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 CCDC105Q8IYK2 499 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 FIBCD1Q8N539 461 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 OR6J1Q8NGC5 347 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 RAVER2Q9HCJ3 691 aaKnown RBP15.28■□□□□ 0.04
UBR4-210ENST00000466969 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
UBR4-210ENST00000466969 RWDD3Q9Y3V2 267 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 R4GN57 208 aa15.28■□□□□ 0.04
UBR4-210ENST00000466969 SOBPA7XYQ1 873 aa15.27■□□□□ 0.04
UBR4-210ENST00000466969 BRD1O95696 1058 aa15.27■□□□□ 0.04
UBR4-210ENST00000466969 ZC3H14Q6PJT7 736 aaKnown RBP15.27■□□□□ 0.04
UBR4-210ENST00000466969 PRPF38AQ8NAV1 312 aaKnown RBP15.27■□□□□ 0.04
UBR4-210ENST00000466969 HOMER2Q9NSB8 354 aa15.27■□□□□ 0.04
UBR4-210ENST00000466969 CDV3Q9UKY7 258 aaKnown RBP15.27■□□□□ 0.04
UBR4-210ENST00000466969 MMP1P03956 469 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 EEF2P13639 858 aaKnown RBP15.26■□□□□ 0.03
UBR4-210ENST00000466969 BMPR1AP36894 532 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 RBL2Q08999 1139 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 DTWD2Q8NBA8 298 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 TOP1MTQ969P6 601 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 WDR11Q9BZH6 1224 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 SWAP70Q9UH65 585 aa15.26■□□□□ 0.03
UBR4-210ENST00000466969 DCDC2BA2VCK2 349 aa15.25■□□□□ 0.03
UBR4-210ENST00000466969 UBTFL1P0CB47 393 aaPredicted RBP15.25■□□□□ 0.03
UBR4-210ENST00000466969 AKR1B1P15121 316 aa15.25■□□□□ 0.03
UBR4-210ENST00000466969 DBF4BQ8NFT6 615 aa15.25■□□□□ 0.03
UBR4-210ENST00000466969 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
UBR4-210ENST00000466969 RTKNQ9BST9 563 aa15.25■□□□□ 0.03
UBR4-210ENST00000466969 ACAD9Q9H845 621 aa15.25■□□□□ 0.03
UBR4-210ENST00000466969 MCM9Q9NXL9 1143 aa15.25■□□□□ 0.03
UBR4-210ENST00000466969 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
UBR4-210ENST00000466969 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 CYP2E1P05181 493 aaPredicted RBP15.24■□□□□ 0.03
UBR4-210ENST00000466969 AOC1P19801 751 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 SP100P23497 879 aaPredicted RBP15.24■□□□□ 0.03
UBR4-210ENST00000466969 NRIP1P48552 1158 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
UBR4-210ENST00000466969 GPR161Q8N6U8 529 aaKnown RBP15.24■□□□□ 0.03
UBR4-210ENST00000466969 SUSD6Q92537 303 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 RTP3Q9BQQ7 232 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 NR2E1Q9Y466 385 aa15.24■□□□□ 0.03
UBR4-210ENST00000466969 FLNBO75369 2602 aaKnown RBP15.23■□□□□ 0.03
UBR4-210ENST00000466969 PRR5-ARHGAP8B1AHC4 643 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 ARHGAP8P85298 464 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 CWF19L1Q69YN2 538 aaKnown RBP15.23■□□□□ 0.03
UBR4-210ENST00000466969 ADGRD2Q7Z7M1 963 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 RBM23Q86U06 439 aaKnown RBP15.23■□□□□ 0.03
UBR4-210ENST00000466969 KIFC2Q96AC6 838 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 IL17RAQ96F46 866 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 CTAGE1Q96RT6 745 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 NUP88Q99567 741 aaPredicted RBP15.23■□□□□ 0.03
UBR4-210ENST00000466969 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
UBR4-210ENST00000466969 KANSL2Q9H9L4 492 aa15.23■□□□□ 0.03
UBR4-210ENST00000466969 A1CFQ9NQ94 594 aaKnown RBP15.23■□□□□ 0.03
UBR4-210ENST00000466969 MYO10Q9HD67 2058 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 GLP2RO95838 553 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 OAZ1P54368 228 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 EVX2Q03828 476 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 ZNF618Q5T7W0 954 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 SESTD1Q86VW0 696 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 SLC38A10Q9HBR0 1119 aa15.22■□□□□ 0.03
UBR4-210ENST00000466969 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms