RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 MMADHCQ9H3L0 296 aaPredicted RBP6.59□□□□□ -1.35
CLK1-207ENST00000461981 KLC4Q9NSK0 619 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 USP40Q9NVE5 1235 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 TPCN1Q9ULQ1 816 aa6.59□□□□□ -1.35
CLK1-207ENST00000461981 TCP10L2B9ZVM9 353 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 MAP2K7O14733 419 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 TNPO2O14787 897 aaKnown RBP6.59□□□□□ -1.36
CLK1-207ENST00000461981 EVI5O60447 810 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 FDX1P10109 184 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 CAP2P40123 477 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 LRRFIP1Q32MZ4 808 aaKnown RBP6.59□□□□□ -1.36
CLK1-207ENST00000461981 CAPRIN2Q6IMN6 1127 aaKnown RBP6.59□□□□□ -1.36
CLK1-207ENST00000461981 DLK2Q6UY11 383 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 HDXQ7Z353 690 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 CEP112Q8N8E3 955 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 AFAP1L1Q8TED9 768 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 NUDT12Q9BQG2 462 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 PI4KBQ9UBF8 816 aa6.59□□□□□ -1.36
CLK1-207ENST00000461981 MYH1P12882 1939 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 SPDYE3A6NKU9 549 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 GOLGA6L19H0YKK7 550 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 DNM1LO00429 736 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 GSPT1P15170 499 aaKnown RBP6.58□□□□□ -1.36
CLK1-207ENST00000461981 GYG1P46976 350 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 RHBDL3P58872 404 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 PPP2R3AQ06190 1150 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 TMC6Q7Z403 805 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 ARPC5LQ9BPX5 153 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 TRIM4Q9C037 500 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 USP44Q9H0E7 712 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 NUP62CLQ9H1M0 184 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 TMOD4Q9NZQ9 345 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 PNMA2Q9UL42 364 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 A0A1B0GVG6 124 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 FANCGO15287 622 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 RNF40O75150 1001 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 TAF5LO75529 589 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 KIAA0754O94854 1291 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 CDR1P51861 262 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
CLK1-207ENST00000461981 VPS53Q5VIR6 699 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 MFSD14CQ5VZR4 134 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 RBM12BQ8IXT5 1001 aaKnown RBP6.58□□□□□ -1.36
CLK1-207ENST00000461981 BCAS4Q8TDM0 211 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 KIAA1683Q9H0B3 1180 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 DDX19BQ9UMR2 479 aa6.58□□□□□ -1.36
CLK1-207ENST00000461981 TRIM27P14373 513 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 CA8P35219 290 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 PRKCZQ05513 592 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 MYBPC2Q14324 1141 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 ZNF467Q7Z7K2 595 aaPredicted RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 ARRDC4Q8NCT1 418 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 GPRC5AQ8NFJ5 357 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 OR8K1Q8NGG5 319 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 FAM71BQ8TC56 605 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 RSRC1Q96IZ7 334 aaKnown RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 RNF208Q9H0X6 261 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 SH2D4AQ9H788 454 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 SLC39A2Q9NP94 309 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 MAPK8IP1Q9UQF2 711 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 CCDC151A5D8V7 595 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L15C9J2P7 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L13C9JLJ4 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L11C9JVI0 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L18D6R9N7 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L22D6RA61 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L17D6RBQ6 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L19D6RCP7 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L20D6RJB6 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 ZKSCAN1P17029 563 aaPredicted RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 FNTAP49354 379 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 CEBPZQ03701 1054 aaKnown RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 USP17L24Q0WX57 530 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 PDIA5Q14554 519 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 GNPTABQ3T906 1256 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 TATDN1Q6P1N9 297 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 SLC30A9Q6PML9 568 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 PLEKHH3Q7Z736 793 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 FAM81AQ8TBF8 368 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 SLX1AQ9BQ83 275 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 TNMDQ9H2S6 317 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 LRRC37A2A6NM11 1700 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 LGR5O75473 907 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 ZNF189O75820 626 aaPredicted RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 UPP2O95045 317 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 IFIT2P09913 472 aaKnown RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 FLT3LGP49771 235 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 BACE1P56817 501 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 DNM1Q05193 864 aaKnown RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 MAP2K5Q13163 448 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 PRAMEF18Q5VWM3 479 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 TMEM57Q8N5G2 664 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 MAGEB6Q8N7X4 407 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 LPAR1Q92633 364 aa6.57□□□□□ -1.36
CLK1-207ENST00000461981 TSR2Q969E8 191 aaKnown RBP6.57□□□□□ -1.36
CLK1-207ENST00000461981 TOX2Q96NM4 488 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms