RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 BVESQ8NE79 360 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 BRF1Q92994 677 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 ARHGEF4Q9NR80 690 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 TMEM260Q9NX78 707 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 CGGBP1Q9UFW8 167 aaPredicted RBP5.09□□□□□ -1.59
RFC4-211ENST00000460408 MINPP1Q9UNW1 487 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 EMC9Q9Y3B6 208 aa5.09□□□□□ -1.59
RFC4-211ENST00000460408 IQCA1LA6NCM1 817 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 FKTNO75072 461 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 ARL4AP40617 200 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 PPP2R2AP63151 447 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 KIR3DS1Q14943 382 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 LONRF2Q1L5Z9 754 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 TRIM59Q8IWR1 403 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 FIBCD1Q8N539 461 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 ZBTB38Q8NAP3 1195 aaPredicted RBP5.08□□□□□ -1.6
RFC4-211ENST00000460408 ADCY4Q8NFM4 1077 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 NOL6Q9H6R4 1146 aaKnown RBP5.08□□□□□ -1.6
RFC4-211ENST00000460408 TNFRSF12AQ9NP84 129 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 CHST7Q9NS84 486 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 CNOT11Q9UKZ1 510 aaKnown RBP5.08□□□□□ -1.6
RFC4-211ENST00000460408 DIS3Q9Y2L1 958 aaKnown RBP5.08□□□□□ -1.6
RFC4-211ENST00000460408 PTCH2Q9Y6C5 1203 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 TAF6LQ9Y6J9 622 aa5.08□□□□□ -1.6
RFC4-211ENST00000460408 IRS2Q9Y4H2 1338 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 H0Y8X5 98 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 FFAR3O14843 346 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 BUB1BO60566 1050 aaPredicted RBP5.07□□□□□ -1.6
RFC4-211ENST00000460408 FAM153BP0C7A2 387 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 IGFBP6P24592 240 aaPredicted RBP5.07□□□□□ -1.6
RFC4-211ENST00000460408 GRIA2P42262 883 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 GRB10Q13322 594 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 RAB3GAP1Q15042 981 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 NOL9Q5SY16 702 aaKnown RBP5.07□□□□□ -1.6
RFC4-211ENST00000460408 ZFYVE27Q5T4F4 411 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 FOXB2Q5VYV0 432 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 SLCO6A1Q86UG4 719 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 FAM177A1Q8N128 213 aaPredicted RBP5.07□□□□□ -1.6
RFC4-211ENST00000460408 BDH2Q9BUT1 245 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 ACSL6Q9UKU0 697 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 GPR55Q9Y2T6 319 aaPredicted RBP5.07□□□□□ -1.6
RFC4-211ENST00000460408 SUGT1Q9Y2Z0 365 aa5.07□□□□□ -1.6
RFC4-211ENST00000460408 A0A1W2PQ45 241 aaPredicted RBP5.06□□□□□ -1.6
RFC4-211ENST00000460408 A0A1W2PQY0 241 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 ESYT3A0FGR9 886 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 AGRPO00253 132 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 PRICKLE3O43900 615 aaPredicted RBP5.06□□□□□ -1.6
RFC4-211ENST00000460408 ENDOUP21128 410 aaKnown RBP5.06□□□□□ -1.6
RFC4-211ENST00000460408 KCNC1P48547 511 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 CEBPAP49715 358 aaPredicted RBP5.06□□□□□ -1.6
RFC4-211ENST00000460408 CYP4F8P98187 520 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 CYP4F3Q08477 520 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 RTP5Q14D33 572 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 YOD1Q5VVQ6 348 aaPredicted RBP5.06□□□□□ -1.6
RFC4-211ENST00000460408 EGFLAMQ63HQ2 1017 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 EXOC2Q96KP1 924 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 AARSD1Q9BTE6 412 aaKnown RBP5.06□□□□□ -1.6
RFC4-211ENST00000460408 ERVK13-1Q9NX77 482 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 AKT3Q9Y243 479 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 MYRFQ9Y2G1 1151 aa5.06□□□□□ -1.6
RFC4-211ENST00000460408 GSNP06396 782 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 FGFR1P11362 822 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 PRKCAP17252 672 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 HSD3B2P26439 372 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 BMP8BP34820 402 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 SLURP1P55000 103 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 NCKAP1LP55160 1127 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 HSP90AA2PQ14568 343 aaPredicted RBP5.05□□□□□ -1.6
RFC4-211ENST00000460408 PPP2R5DQ14738 602 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 PLEKHG4Q58EX7 1191 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 ZC3H12BQ5HYM0 836 aaKnown RBP5.05□□□□□ -1.6
RFC4-211ENST00000460408 POMZP3Q6PJE2 187 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 CRTC3Q6UUV7 619 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 RPTNQ6XPR3 784 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 CRACR2BQ8N4Y2 399 aaPredicted RBP5.05□□□□□ -1.6
RFC4-211ENST00000460408 ZSWIM2Q8NEG5 633 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 BTN2A2Q8WVV5 523 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 KISS1RQ969F8 398 aaPredicted RBP5.05□□□□□ -1.6
RFC4-211ENST00000460408 PPP1R14AQ96A00 147 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 MCMBPQ9BTE3 642 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 DSCC1Q9BVC3 393 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 NKX2-4Q9H2Z4 354 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 FANCLQ9NW38 375 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 LRP2BPQ9P2M1 347 aa5.05□□□□□ -1.6
RFC4-211ENST00000460408 SF3B6Q9Y3B4 125 aaKnown RBP5.05□□□□□ -1.6
RFC4-211ENST00000460408 TRAV20A0A0B4J274 112 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 NUDT19A8MXV4 375 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 MEIS1O00470 390 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 NOP56O00567 594 aaKnown RBP5.04□□□□□ -1.6
RFC4-211ENST00000460408 VAMP4O75379 141 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 ZNF205O95201 554 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 KCNH1O95259 989 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 SCG5P05408 212 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 INSRRP14616 1297 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 GTF2IRD2BQ6EKJ0 949 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 GTF2IRD2Q86UP8 949 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 APPBP2Q92624 585 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 OSBP2Q969R2 916 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms