RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ATP2B1P20020 1258 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 ARHGAP4P98171 946 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 MYL5Q02045 173 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PPATQ06203 517 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 NBPF12Q5TAG4 269 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 MIGA2Q7L4E1 593 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 CABP7Q86V35 215 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 CLEC10AQ8IUN9 316 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PROCA1Q8NCQ7 364 aaPredicted RBP7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 NOC3LQ8WTT2 800 aaKnown RBP7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PIBF1Q8WXW3 757 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 IMPACTQ9P2X3 320 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 PCDHA5Q9Y5H7 936 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 RPTORQ8N122 1335 aa7.7□□□□□ -1.18
ECHDC1-210ENST00000454859 GLTPD2A6NH11 291 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 ATXN8OSP0DMR3 200 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 ECE1P42892 770 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 PABPC4Q13310 644 aaKnown RBP eCLIP7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 STIM1Q13586 685 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 COG2Q14746 738 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 IL17AQ16552 155 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 C9orf131Q5VYM1 1079 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 LDHDQ86WU2 507 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 WRNIP1Q96S55 665 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 RIT2Q99578 217 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 WDR11Q9BZH6 1224 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 DNAJC25Q9H1X3 360 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 LRWD1Q9UFC0 647 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 PCDHA12Q9UN75 941 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 AFG3L2Q9Y4W6 797 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 CTDP1Q9Y5B0 961 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 CSADQ9Y600 493 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 KIF20AO95235 890 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 VCAM1P19320 739 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 SPAG1Q07617 926 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 TMEM119Q4V9L6 283 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 ZNF658Q5TYW1 1059 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 RDM1Q8NG50 284 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 TRPM4Q8TD43 1214 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 RASGRP4Q8TDF6 673 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 DHX58Q96C10 678 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 EPSTI1Q96J88 318 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 CDK5RAP3Q96JB5 506 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 CTAGE1Q96RT6 745 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 POLR3CQ9BUI4 534 aaPredicted RBP7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 TMEM60Q9H2L4 133 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 CPVLQ9H3G5 476 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 KCND2Q9NZV8 630 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 FBXO40Q9UH90 709 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 MAN1B1Q9UKM7 699 aa7.69□□□□□ -1.18
ECHDC1-210ENST00000454859 SSC5DA1L4H1 1573 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 B4DLN1 442 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 RHOBTB3O94955 611 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 ADCY5O95622 1261 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 EPS15P42566 896 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 GSDMDP57764 484 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 SV2BQ7L1I2 683 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 ERO1BQ86YB8 467 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 DHX40Q8IX18 779 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 ANKRD13AQ8IZ07 590 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 CHST13Q8NET6 341 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 TUFT1Q9NNX1 390 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 BMP2KQ9NSY1 1161 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 EMILIN3Q9NT22 766 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 CCPG1Q9ULG6 757 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 SLC45A1Q9Y2W3 748 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 COL11A1P12107 1806 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 WNT7AO00755 349 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 IRF6O14896 467 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 RAD21O60216 631 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 MARCH6O60337 910 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 USP2O75604 605 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 EGFRP00533 1210 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 HIRAP54198 1017 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 GRIN1Q05586 938 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 PPIL2Q13356 520 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 PPP2R5CQ13362 524 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 PNOCQ13519 176 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 NOM1Q5C9Z4 860 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 PCNX4Q63HM2 1172 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 CATSPERGQ6ZRH7 1159 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 FASTKD5Q7L8L6 764 aaKnown RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 ARMC9Q7Z3E5 817 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 RNF214Q8ND24 703 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 ETNPPLQ8TBG4 499 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 SLC5A5Q92911 643 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 KIFC2Q96AC6 838 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 DHTKD1Q96HY7 919 aaPredicted RBP7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 CDHR1Q96JP9 859 aa7.68□□□□□ -1.18
ECHDC1-210ENST00000454859 TTC12Q9H892 705 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms