RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 PPP1R2P41236 205 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 AFMP43652 599 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 JAG1P78504 1218 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 MAP3K9P80192 1104 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 DPYDQ12882 1025 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 PDXDC2PQ6P474 469 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.17□□□□□ -0.14
NUP85-202ENST00000449421 C2orf69Q8N8R5 385 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 MTMR9Q96QG7 549 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 FEZ1Q99689 392 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 AS3MTQ9HBK9 375 aa14.17□□□□□ -0.14
NUP85-202ENST00000449421 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
NUP85-202ENST00000449421 CYP3A7-CYP3A51PA0A087WV96 503 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 PIK3CDO00329 1044 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 TBX3O15119 743 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 CYP3A7P24462 503 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 INPP5BP32019 993 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 CLCN1P35523 988 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 TECP42680 631 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 TXKP42681 527 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 ECE1P42892 770 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 USP14P54578 494 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 KRT79Q5XKE5 535 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 ISM2Q6H9L7 571 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 SLFN12Q8IYM2 578 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 ANKRD13AQ8IZ07 590 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 SAMD3Q8N6K7 520 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 IGSF22Q8N9C0 903 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 CDK5RAP3Q96JB5 506 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 WRNIP1Q96S55 665 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 IMPACTQ9P2X3 320 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 LRWD1Q9UFC0 647 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 DDX25Q9UHL0 483 aaKnown RBP14.16□□□□□ -0.14
NUP85-202ENST00000449421 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 RABGAP1Q9Y3P9 1069 aa14.16□□□□□ -0.14
NUP85-202ENST00000449421 ABCB11O95342 1321 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 A0A087X0B3 334 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 TMEM88BA6NKF7 163 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
NUP85-202ENST00000449421 FOXN1O15353 648 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 AP5Z1O43299 807 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 PRKG1Q13976 671 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 KCNB1Q14721 858 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 UBE2SQ16763 222 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 SHROOM1Q2M3G4 852 aaPredicted RBP14.15□□□□□ -0.14
NUP85-202ENST00000449421 FAM83BQ5T0W9 1011 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 MOB2Q70IA6 237 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 SCYL3Q8IZE3 742 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 ACER1Q8TDN7 264 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 HHIPL1Q96JK4 782 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 NUP88Q99567 741 aaPredicted RBP14.15□□□□□ -0.14
NUP85-202ENST00000449421 ANO3Q9BYT9 981 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 RANBP17Q9H2T7 1088 aaKnown RBP14.15□□□□□ -0.14
NUP85-202ENST00000449421 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 STK17AQ9UEE5 414 aa14.15□□□□□ -0.14
NUP85-202ENST00000449421 BAZ2BQ9UIF8 2168 aaKnown RBP14.15□□□□□ -0.15
NUP85-202ENST00000449421 MEIS2O14770 477 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 ZNF500O60304 480 aaPredicted RBP14.14□□□□□ -0.15
NUP85-202ENST00000449421 GSDMDP57764 484 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 STIM1Q13586 685 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 VGLL4Q14135 290 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 TTLL12Q14166 644 aaPredicted RBP14.14□□□□□ -0.15
NUP85-202ENST00000449421 NCAPHQ15003 741 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 KARSQ15046 597 aaKnown RBP14.14□□□□□ -0.15
NUP85-202ENST00000449421 ZNF658Q5TYW1 1059 aaPredicted RBP14.14□□□□□ -0.15
NUP85-202ENST00000449421 SAPCD2Q86UD0 394 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 SPICE1Q8N0Z3 855 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 PRPF38AQ8NAV1 312 aaKnown RBP14.14□□□□□ -0.15
NUP85-202ENST00000449421 ZKSCAN4Q969J2 545 aaPredicted RBP14.14□□□□□ -0.15
NUP85-202ENST00000449421 NT5C3AQ9H0P0 336 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 PCDHA12Q9UN75 941 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 TLL2Q9Y6L7 1015 aa14.14□□□□□ -0.15
NUP85-202ENST00000449421 GCOM1H8Y6P7 765 aaPredicted RBP14.13□□□□□ -0.15
NUP85-202ENST00000449421 NRDCO43847 1150 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 SERPINC1P01008 464 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 RPN1P04843 607 aaKnown RBP14.13□□□□□ -0.15
NUP85-202ENST00000449421 CYP3A4P08684 503 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 POLR2MP0CAP2 368 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 PTPRAP18433 802 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 CDK11BP21127 795 aaKnown RBP14.13□□□□□ -0.15
NUP85-202ENST00000449421 APLP1P51693 650 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 SV2BQ7L1I2 683 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 GRAMD1CQ8IYS0 662 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 KCTD17Q8N5Z5 321 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 MBOAT7Q96N66 472 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 WDR18Q9BV38 432 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 TTC12Q9H892 705 aaPredicted RBP14.13□□□□□ -0.15
NUP85-202ENST00000449421 KBTBD4Q9NVX7 518 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 MAP3K20Q9NYL2 800 aaKnown RBP14.13□□□□□ -0.15
NUP85-202ENST00000449421 CTDP1Q9Y5B0 961 aaPredicted RBP14.13□□□□□ -0.15
NUP85-202ENST00000449421 CSADQ9Y600 493 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 KDM3AQ9Y4C1 1321 aa14.13□□□□□ -0.15
NUP85-202ENST00000449421 USP17L15C9J2P7 530 aa14.12□□□□□ -0.15
NUP85-202ENST00000449421 USP17L13C9JLJ4 530 aa14.12□□□□□ -0.15
NUP85-202ENST00000449421 USP17L11C9JVI0 530 aa14.12□□□□□ -0.15
NUP85-202ENST00000449421 USP17L18D6R9N7 530 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms