RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SYTL5Q8TDW5 730 aaPredicted RBP28.21■■■□□ 2.11
RFFL-206ENST00000447669 SYAP1Q96A49 352 aaPredicted RBP28.21■■■□□ 2.11
RFFL-206ENST00000447669 A0A087X0B3 334 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 BTBD19C9JJ37 291 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 CNMDO75829 334 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 OAZ1P54368 228 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 PPP4R3AQ6IN85 833 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 DTHD1Q6ZMT9 781 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 ZNF579Q8NAF0 562 aaKnown RBP28.21■■■□□ 2.11
RFFL-206ENST00000447669 TAAR1Q96RJ0 339 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 NUP62CLQ9H1M0 184 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 KCNH3Q9ULD8 1083 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 MORC2Q9Y6X9 1032 aaPredicted RBP28.21■■■□□ 2.11
RFFL-206ENST00000447669 ATP2A1O14983 1001 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 SYKP43405 635 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 USP11P51784 963 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 BAATQ14032 418 aaPredicted RBP28.2■■■□□ 2.11
RFFL-206ENST00000447669 Q3C1V9 767 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 ARL6IP4Q66PJ3 421 aaKnown RBP28.2■■■□□ 2.11
RFFL-206ENST00000447669 RNF207Q6ZRF8 634 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 GAS2L3Q86XJ1 694 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 MCF2L2Q86YR7 1114 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 MTMR9Q96QG7 549 aa28.2■■■□□ 2.11
RFFL-206ENST00000447669 A0A0G2JMZ2 1700 aa28.2■■■□□ 2.1
RFFL-206ENST00000447669 TECP42680 631 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 GTF2A2P52657 109 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 PRR16Q569H4 304 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 SAPCD2Q86UD0 394 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 IL31RAQ8NI17 732 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 HAS1Q92839 578 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 CLSTN2Q9H4D0 955 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 DDX19AQ9NUU7 478 aaKnown RBP28.19■■■□□ 2.1
RFFL-206ENST00000447669 RBPJLQ9UBG7 517 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 RBBP6Q7Z6E9 1792 aaKnown RBP28.19■■■□□ 2.1
RFFL-206ENST00000447669 CETPP11597 493 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 ZNF157P51786 506 aaPredicted RBP28.19■■■□□ 2.1
RFFL-206ENST00000447669 GSE1Q14687 1217 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 FAM43AQ8N2R8 423 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 PTPN18Q99952 460 aa28.19■■■□□ 2.1
RFFL-206ENST00000447669 PDHXO00330 501 aa28.18■■■□□ 2.1
RFFL-206ENST00000447669 TNMDQ9H2S6 317 aa28.18■■■□□ 2.1
RFFL-206ENST00000447669 POLR2DO15514 142 aaKnown RBP28.18■■■□□ 2.1
RFFL-206ENST00000447669 KINO60870 393 aaKnown RBP28.18■■■□□ 2.1
RFFL-206ENST00000447669 OSBPP22059 807 aa28.18■■■□□ 2.1
RFFL-206ENST00000447669 LONRF3Q496Y0 759 aa28.18■■■□□ 2.1
RFFL-206ENST00000447669 LENG9Q96B70 501 aa28.18■■■□□ 2.1
RFFL-206ENST00000447669 SPATC1LQ9H0A9 340 aa28.18■■■□□ 2.1
RFFL-206ENST00000447669 FAM237AA0A1B0GTK4 181 aa28.17■■■□□ 2.1
RFFL-206ENST00000447669 MCTP2Q6DN12 878 aa28.17■■■□□ 2.1
RFFL-206ENST00000447669 FAM13BQ9NYF5 915 aa28.17■■■□□ 2.1
RFFL-206ENST00000447669 EIF2AK2P19525 551 aaKnown RBP28.16■■■□□ 2.1
RFFL-206ENST00000447669 ZNF76P36508 570 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 RASAL3Q86YV0 1011 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 A1CFQ9NQ94 594 aaKnown RBP28.16■■■□□ 2.1
RFFL-206ENST00000447669 CYP3A7-CYP3A51PA0A087WV96 503 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 LAD1O00515 517 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 CYP3A7P24462 503 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 PRPHP41219 470 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 GHRHRQ02643 423 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 NCAPG2Q86XI2 1143 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 MOV10L1Q9BXT6 1211 aaKnown RBP28.16■■■□□ 2.1
RFFL-206ENST00000447669 ACAD9Q9H845 621 aa28.16■■■□□ 2.1
RFFL-206ENST00000447669 ZBTB48P10074 688 aaPredicted RBP28.15■■■□□ 2.1
RFFL-206ENST00000447669 GCFC2P16383 781 aaKnown RBP28.15■■■□□ 2.1
RFFL-206ENST00000447669 MBOAT7Q96N66 472 aa28.15■■■□□ 2.1
RFFL-206ENST00000447669 CYP3A4P08684 503 aa28.14■■■□□ 2.1
RFFL-206ENST00000447669 PABPC4Q13310 644 aaKnown RBP eCLIP28.14■■■□□ 2.1
RFFL-206ENST00000447669 MB21D1Q8N884 522 aa28.14■■■□□ 2.1
RFFL-206ENST00000447669 PLIN2Q99541 437 aa28.14■■■□□ 2.1
RFFL-206ENST00000447669 TTC12Q9H892 705 aaPredicted RBP28.14■■■□□ 2.1
RFFL-206ENST00000447669 CYP39A1Q9NYL5 469 aa28.14■■■□□ 2.1
RFFL-206ENST00000447669 PCNTO95613 3336 aa28.14■■■□□ 2.1
RFFL-206ENST00000447669 A0A087WWV3 80 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 POTEMA6NI47 508 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 FOXN1O15353 648 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 LONP1P36776 959 aaKnown RBP28.14■■■□□ 2.09
RFFL-206ENST00000447669 ZNF445P59923 1031 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 ORC2Q13416 577 aaPredicted RBP28.14■■■□□ 2.09
RFFL-206ENST00000447669 ZRSR1Q15695 479 aaKnown RBP28.14■■■□□ 2.09
RFFL-206ENST00000447669 RIOX2Q8IUF8 465 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 SDF4Q9BRK5 362 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 PNMA2Q9UL42 364 aa28.14■■■□□ 2.09
RFFL-206ENST00000447669 IGLV3-22A0A075B6J6 115 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 MARCH6O60337 910 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 CIITAP33076 1130 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 DHX58Q96C10 678 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 RMDN3Q96TC7 470 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 SERTAD1Q9UHV2 236 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 RPTORQ8N122 1335 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 ERCC3P19447 782 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 KARSQ15046 597 aaKnown RBP28.13■■■□□ 2.09
RFFL-206ENST00000447669 GRAMD1CQ8IYS0 662 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 SMC1BQ8NDV3 1235 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 KCNMB3Q9NPA1 279 aa28.13■■■□□ 2.09
RFFL-206ENST00000447669 LCTP09848 1927 aa28.12■■■□□ 2.09
RFFL-206ENST00000447669 Q4G0T1 1027 aa28.12■■■□□ 2.09
RFFL-206ENST00000447669 RGMBQ6NW40 437 aa28.12■■■□□ 2.09
RFFL-206ENST00000447669 ETNPPLQ8TBG4 499 aa28.12■■■□□ 2.09
RFFL-206ENST00000447669 SMCR8Q8TEV9 937 aaPredicted RBP28.12■■■□□ 2.09
RFFL-206ENST00000447669 MSH4O15457 936 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms