RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TMEM39AQ9NV64 488 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 PNMA2Q9UL42 364 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 REV3LO60673 3130 aa12.66□□□□□ -0.38
SF3A1-203ENST00000444440 UMODL1Q5DID0 1318 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 SH2B2O14492 632 aaPredicted RBP12.65□□□□□ -0.38
SF3A1-203ENST00000444440 ZBTB5O15062 677 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 PRC1O43663 620 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 CFBP00751 764 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 CD4P01730 458 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 RXRAP19793 462 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 HSD17B4P51659 736 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 GHRHRQ02643 423 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 ZNF654Q8IZM8 581 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 IL31RAQ8NI17 732 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 AMNQ9BXJ7 453 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 ANO2Q9NQ90 1003 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 MRPL11Q9Y3B7 192 aaKnown RBP12.65□□□□□ -0.38
SF3A1-203ENST00000444440 Q9Y3F1 56 aa12.65□□□□□ -0.38
SF3A1-203ENST00000444440 KAT6AQ92794 2004 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 ERICH2A1L162 156 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 DCDC2CA8MYV0 355 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 PLEKHA8P1O95397 391 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 RAG1P15918 1043 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
SF3A1-203ENST00000444440 HOXA13P31271 388 aaPredicted RBP12.64□□□□□ -0.39
SF3A1-203ENST00000444440 ITGA7Q13683 1181 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 CMTR1Q8N1G2 835 aaKnown RBP12.64□□□□□ -0.39
SF3A1-203ENST00000444440 OR6J1Q8NGC5 347 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
SF3A1-203ENST00000444440 RMDN3Q96TC7 470 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 PXMP2Q9NR77 195 aa12.64□□□□□ -0.39
SF3A1-203ENST00000444440 SIP14410 1827 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 LOXHD1Q8IVV2 1947 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 B4GALT4O60513 344 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 RGS20O76081 388 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 TIMP1P01033 207 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
SF3A1-203ENST00000444440 PPP2R5BQ15173 497 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 C16orf59Q7L2K0 433 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 CCDC136Q96JN2 1154 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 TRPV6Q9H1D0 765 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 PCDHA1Q9Y5I3 950 aa12.63□□□□□ -0.39
SF3A1-203ENST00000444440 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 CHD9Q3L8U1 2897 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 NR3C2P08235 984 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 MYL3P08590 195 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 TXNP10599 105 aaKnown RBP12.62□□□□□ -0.39
SF3A1-203ENST00000444440 CYP2C18P33260 490 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 MCM5P33992 734 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
SF3A1-203ENST00000444440 CASC1Q6TDU7 716 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 MCF2L2Q86YR7 1114 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 SRBD1Q8N5C6 995 aaKnown RBP12.62□□□□□ -0.39
SF3A1-203ENST00000444440 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 NSUN6Q8TEA1 469 aaKnown RBP12.62□□□□□ -0.39
SF3A1-203ENST00000444440 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
SF3A1-203ENST00000444440 VWCEQ96DN2 955 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 PDCD2LQ9BRP1 358 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 MYO9BQ13459 2157 aa12.62□□□□□ -0.39
SF3A1-203ENST00000444440 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 A6NJR5 290 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 CDC45O75419 566 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 CABYRO75952 493 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 DDAH1O94760 285 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 CSF2RAP15509 400 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 FPGSQ05932 587 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 TTLL4Q14679 1199 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 PGM5Q15124 567 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 STXBP2Q15833 593 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 ARHGEF16Q5VV41 709 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 FAM109BQ6ICB4 259 aaPredicted RBP12.61□□□□□ -0.39
SF3A1-203ENST00000444440 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
SF3A1-203ENST00000444440 SPZ1Q9BXG8 430 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 MAF1Q9H063 256 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 WNT8AQ9H1J5 351 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 TRMT13Q9NUP7 481 aaKnown RBP12.61□□□□□ -0.39
SF3A1-203ENST00000444440 MTMR10Q9NXD2 777 aa12.61□□□□□ -0.39
SF3A1-203ENST00000444440 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 NKRFO15226 690 aaKnown RBP eCLIP12.6□□□□□ -0.39
SF3A1-203ENST00000444440 ZEB2O60315 1214 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 MMP3P08254 477 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 ACRP10323 421 aa12.6□□□□□ -0.39
SF3A1-203ENST00000444440 CPT1AP50416 773 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms