RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SEMA4AQ9H3S1 761 aa17.26■□□□□ 0.35
SYNCRIP-203ENST00000444272 SPEGQ15772 3267 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 ASB14A6NK59 587 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 CHMP4BP1P59074 171 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 KIAA1211Q6ZU35 1233 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 HAUS7Q99871 368 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 RAVER2Q9HCJ3 691 aaKnown RBP17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 COPRSQ9NQ92 184 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 FBXO40Q9UH90 709 aa17.25■□□□□ 0.35
SYNCRIP-203ENST00000444272 UQCRFS1P1P0C7P4 283 aa17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 AKR1B1P15121 316 aa17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 ATXN1P54253 815 aaKnown RBP17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 KREMEN2Q8NCW0 462 aa17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 DHX38Q92620 1227 aaKnown RBP17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 MFSD1Q9H3U5 465 aa17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
SYNCRIP-203ENST00000444272 ATP2A1O14983 1001 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 CYP2E1P05181 493 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 ADRB1P08588 477 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 CKBP12277 381 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 CLCN5P51795 746 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 DUSP28Q4G0W2 176 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 CHST13Q8NET6 341 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 C11orf84Q9BUA3 381 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 HOMER2Q9NSB8 354 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 R4GN57 208 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 ZFYVE26Q68DK2 2539 aa17.23■□□□□ 0.35
SYNCRIP-203ENST00000444272 UPP2O95045 317 aa17.22■□□□□ 0.35
SYNCRIP-203ENST00000444272 BRD1O95696 1058 aa17.22■□□□□ 0.35
SYNCRIP-203ENST00000444272 EEF2P13639 858 aaKnown RBP17.22■□□□□ 0.35
SYNCRIP-203ENST00000444272 MTMR3Q13615 1198 aa17.22■□□□□ 0.35
SYNCRIP-203ENST00000444272 UBALD2Q8IYN6 164 aa17.22■□□□□ 0.35
SYNCRIP-203ENST00000444272 RUBCNQ92622 972 aa17.22■□□□□ 0.35
SYNCRIP-203ENST00000444272 USP17L12C9JPN9 530 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 USP17L21D6R901 530 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 C5orf67F2Z3F1 127 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 LGR5O75473 907 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 ATF7P17544 494 aaPredicted RBP17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 CCDC105Q8IYK2 499 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
SYNCRIP-203ENST00000444272 ZBED4O75132 1171 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 RB1P06400 928 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 RBL2Q08999 1139 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 MBTPS1Q14703 1052 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 ADGRD2Q7Z7M1 963 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 EFHBQ8N7U6 833 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 SMOC2Q9H3U7 446 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 VTA1Q9NP79 307 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 PIH1D3Q9NQM4 214 aaKnown RBP17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 COG6Q9Y2V7 657 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 FRYQ5TBA9 3013 aa17.2■□□□□ 0.34
SYNCRIP-203ENST00000444272 ZZEF1O43149 2961 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 GLP2RO95838 553 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 MMP1P03956 469 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 ARP10275 920 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 SDHBP21912 280 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 BRDTQ58F21 947 aaPredicted RBP17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 CWF19L1Q69YN2 538 aaKnown RBP17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 PRPF38AQ8NAV1 312 aaKnown RBP17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 FLCNQ8NFG4 579 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 DBF4BQ8NFT6 615 aa17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 A1CFQ9NQ94 594 aaKnown RBP17.19■□□□□ 0.34
SYNCRIP-203ENST00000444272 GCN1Q92616 2671 aaKnown RBP17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 MYO10Q9HD67 2058 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 DCDC2BA2VCK2 349 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 PI15O43692 258 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 BMPR1AP36894 532 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 DMWDQ09019 674 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 FIBCD1Q8N539 461 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 SUSD6Q92537 303 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 TOP1MTQ969P6 601 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 WDR11Q9BZH6 1224 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
SYNCRIP-203ENST00000444272 FLNBO75369 2602 aaKnown RBP17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 CAMK1Q14012 370 aa17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 TRAF7Q6Q0C0 670 aa17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 KIFC2Q96AC6 838 aa17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 ACAD9Q9H845 621 aa17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 SLC38A10Q9HBR0 1119 aa17.17■□□□□ 0.34
SYNCRIP-203ENST00000444272 KPNA6O60684 536 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 CYP2D6P10635 497 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 ZAP70P43403 619 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 NRIP1P48552 1158 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 ZNF618Q5T7W0 954 aa17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 RBM23Q86U06 439 aaKnown RBP17.16■□□□□ 0.34
SYNCRIP-203ENST00000444272 DTWD2Q8NBA8 298 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms