RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 PNMA6FA0A0J9YX94 578 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 F5H6K3 240 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 ZSCAN12O43309 604 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 CCNT1O60563 726 aaKnown RBP15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 PPP1R11O60927 126 aaPredicted RBP15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 RPS12P25398 132 aaKnown RBP15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 ZNF280AP59817 542 aaPredicted RBP15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 KLRC3Q07444 240 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 RBL2Q08999 1139 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 PAK1Q13153 545 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 MIGA2Q7L4E1 593 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 NELFBQ8WX92 580 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 CARD6Q9BX69 1037 aa15.58■□□□□ 0.08
PTCHD3-201ENST00000438700 ESYT2A0FGR8 921 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 SOWAHDA6NJG2 315 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 AKR1B15C9JRZ8 316 aaPredicted RBP15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 URI1O94763 535 aaPredicted RBP15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 ZNF658Q5TYW1 1059 aaPredicted RBP15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 MICALL2Q8IY33 904 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 GMCL1P1Q8NEA9 526 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 NUP88Q99567 741 aaPredicted RBP15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 A0A1W2PRG0 241 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 FZD9O00144 591 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 ZRANB2O95218 330 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 NDUFB10O96000 172 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 PRCPP42785 496 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 KRT31Q15323 416 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 KRT25Q7Z3Z0 450 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 PPFIBP1Q86W92 1011 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 FCHSD1Q86WN1 690 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 REXO1Q8N1G1 1221 aaKnown RBP15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 LRRC15Q8TF66 581 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 UBXN4Q92575 508 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 CTAGE1Q96RT6 745 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 VPS16Q9H269 839 aa15.57■□□□□ 0.08
PTCHD3-201ENST00000438700 TRIM49BA6NDI0 452 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 ZBTB5O15062 677 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 SASH3O75995 380 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 FILIP1LQ4L180 1135 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 MTMR8Q96EF0 704 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 BIN2Q9UBW5 565 aaPredicted RBP15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 PGAP2Q9UHJ9 254 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 ZNF541Q9H0D2 1346 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 ADCY7P51828 1080 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 NONOQ15233 471 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 JAKMIP3Q5VZ66 844 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 SAMD7Q7Z3H4 446 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 RMND1Q9NWS8 449 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 TMEM260Q9NX78 707 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 TAB2Q9NYJ8 693 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 ZBTB21Q9ULJ3 1066 aa15.56■□□□□ 0.08
PTCHD3-201ENST00000438700 PHLPP2Q6ZVD8 1323 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 N4BP3O15049 544 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 CASP14P31944 242 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 PBX1P40424 430 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 ECE1P42892 770 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 RASA3Q14644 834 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 GMCL1Q96IK5 515 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 TBC1D12O60347 775 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 OR52Z1P0C646 297 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 TNNI2P48788 182 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 GYS2P54840 703 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 TBC1D10BQ4KMP7 808 aaPredicted RBP15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 SPICE1Q8N0Z3 855 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 WDR24Q96S15 920 aa15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 CNOT7Q9UIV1 285 aaKnown RBP15.55■□□□□ 0.08
PTCHD3-201ENST00000438700 ASTN2O75129 1339 aaPredicted RBP15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 GYPCP04921 128 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 PLCG1P19174 1290 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 MMP14P50281 582 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 GNG11P61952 73 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 QRICH1Q2TAL8 776 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 PPP1R18Q6NYC8 613 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 TMCO3Q6UWJ1 677 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 NEK8Q86SG6 692 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 ACER1Q8TDN7 264 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 TBCKQ8TEA7 893 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 KCNJ18B7U540 433 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 TUBB4AP04350 444 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 TECP42680 631 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 FXR1P51114 621 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 PMS1P54277 932 aaKnown RBP15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 IKQ13123 557 aaPredicted RBP15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 KCNJ12Q14500 433 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 CDC37Q16543 378 aaPredicted RBP15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 PANX2Q96RD6 677 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 MRPL44Q9H9J2 332 aaKnown RBP15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 CALCOCO1Q9P1Z2 691 aa15.54■□□□□ 0.08
PTCHD3-201ENST00000438700 A0A0U1RQJ8 604 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 MFAP3LO75121 409 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 TADA3O75528 432 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 BMP3P12645 472 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 TCP11X2Q5H9J9 407 aa15.53■□□□□ 0.08
PTCHD3-201ENST00000438700 CABP7Q86V35 215 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms