RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ACTR5Q9H9F9 607 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 PLAAQ9Y263 795 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 TNKSO95271 1327 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 RPS6KA4O75676 772 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 MDH1P40925 334 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 TOB1P50616 345 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 TTC38Q5R3I4 469 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 ANKS4BQ8N8V4 417 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 CDK5RAP3Q96JB5 506 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 OSBPL9Q96SU4 736 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 TRIM31Q9BZY9 425 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 LUC7LQ9NQ29 371 aaKnown RBP8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 ZSWIM5Q9P217 1185 aa8.18□□□□□ -1.1
SYNPO2-203ENST00000434046 ZNF804BA4D1E1 1349 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ZSCAN5CA6NGD5 496 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 PPP1R3GB7ZBB8 358 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 SEMA3EO15041 775 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 CAMTA2O94983 1202 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RPN1P04843 607 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 VIMP08670 466 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 TMOD1P28289 359 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 DNM2P50570 870 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RASSF7Q02833 373 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 PREPLQ4J6C6 727 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 CDKAL1Q5VV42 579 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 PIK3AP1Q6ZUJ8 805 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 TBC1D1Q86TI0 1168 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 OR2W6PQ8NHA6 318 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 STAG1Q8WVM7 1258 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 TUBGCP2Q9BSJ2 902 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 FOXP1Q9H334 677 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 EXOC1Q9NV70 894 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 KCNG1Q9UIX4 513 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RWDD2AQ9UIY3 292 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 GGA1Q9UJY5 639 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 SNX12Q9UMY4 172 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 H7C1D1 291 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 SARSP49591 514 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 GNAQP50148 359 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 DYNLL1P63167 89 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 PICALMQ13492 652 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 PAPD7Q5XG87 772 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RRAGAQ7L523 313 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 CCDC63Q8NA47 563 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 AENQ8WTP8 325 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 CELF1Q92879 486 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 CYFIP2Q96F07 1278 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 NOX5Q96PH1 765 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 YIPF3Q9GZM5 350 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RBM28Q9NW13 759 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 BSDC1Q9NW68 430 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 STK38LQ9Y2H1 464 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 REXO2Q9Y3B8 237 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ABCC12Q96J65 1359 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 GRIN2DO15399 1336 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ITIH6Q6UXX5 1313 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ANO9A1A5B4 782 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 GMNCA6NCL1 334 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 FTCDO95954 541 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 CDC25CP30307 473 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 PRCPP42785 496 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 KLK7P49862 253 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ASIC1P78348 528 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ZKSCAN8Q15776 578 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM133BQ5BKY9 247 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM47AQ5JRC9 791 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 TBC1D9BQ66K14 1250 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 FANCBQ8NB91 859 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 HVCN1Q96D96 273 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 SGSM3Q96HU1 749 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RBM17Q96I25 401 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 ATP6V1G3Q96LB4 118 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 NARFQ9UHQ1 456 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 MCM8Q9UJA3 840 aa8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
SYNPO2-203ENST00000434046 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM170AA1A519 330 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 PLCG2P16885 1265 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 EPS15P42566 896 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 TNNC1P63316 161 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 DPYDQ12882 1025 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 PROCA1Q8NCQ7 364 aaPredicted RBP8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 FERMT2Q96AC1 680 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 NLRC4Q9NPP4 1024 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 DDX20Q9UHI6 824 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 TPX2Q9ULW0 747 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 FAM208AQ9UK61 1670 aaKnown RBP8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 A0A087X0B3 334 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 RCCD1A6NED2 376 aa8.16□□□□□ -1.1
SYNPO2-203ENST00000434046 LGALS16A8MUM7 142 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms