RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 SGO2Q562F6 1265 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 NUDCD3Q8IVD9 361 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 TESK2Q96S53 571 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 KIAA1024Q9UPX6 916 aa12.43□□□□□ -0.42
SEC16A-206ENST00000431893 KRT1P04264 644 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 TCP1P17987 556 aaKnown RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 MSH2P43246 934 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 BCAMP50895 628 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 POLGP54098 1239 aaPredicted RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 H0Y3Z8 333 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 PDHA1P08559 390 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 H2AFZP0C0S5 128 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 MAPK4P31152 587 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 IQCB1Q15051 598 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 H2AFVQ71UI9 128 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 CDKL2Q92772 493 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 LARSQ9P2J5 1176 aaKnown RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SEPT9Q9UHD8 586 aaPredicted RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 GFPT2O94808 682 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SPATS2Q86XZ4 545 aaKnown RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 EPS15L1Q9UBC2 864 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 ANGPTL8Q6UXH0 198 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SULF1Q8IWU6 871 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 GSPT2Q8IYD1 628 aaKnown RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 IRAK4Q9NWZ3 460 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SYNDIG1LA6NDD5 238 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 DPCR1Q3MIW9 517 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 TBC1D1Q86TI0 1168 aaPredicted RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SMCR8Q8TEV9 937 aaPredicted RBP12.42□□□□□ -0.42
SEC16A-206ENST00000431893 TUBGCP2Q9BSJ2 902 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
SEC16A-206ENST00000431893 GCP02774 474 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 DHX9Q08211 1270 aaKnown RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 ART3Q13508 389 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 RAB44Q7Z6P3 723 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 SMYD3Q9H7B4 428 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 CCDC195A0A1B0GUA6 201 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 LPXNO60711 386 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 KRT80Q6KB66 452 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 DARS2Q6PI48 645 aaKnown RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 ZBTB33Q86T24 672 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 NCAPG2Q86XI2 1143 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 DNAAF3Q8N9W5 541 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 LZTS2Q9BRK4 669 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 CAPN11Q9UMQ6 739 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 ADCY9O60503 1353 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 NPR1P16066 1061 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 OSTNP61366 133 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 SPOPLQ6IQ16 392 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 SPICE1Q8N0Z3 855 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 YTHDC2Q9H6S0 1430 aaKnown RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 HNRNPCL2B2RXH8 293 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 HNRNPCL1O60812 293 aaKnown RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 GUCY2CP25092 1073 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 TRAPPC10P48553 1259 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 RFX8Q6ZV50 586 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 NEK8Q86SG6 692 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 PLA2G4DQ86XP0 818 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 EFCAB13Q8IY85 973 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 DSCC1Q9BVC3 393 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 HESX1Q9UBX0 185 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 TSR3Q9UJK0 312 aaKnown RBP12.41□□□□□ -0.42
SEC16A-206ENST00000431893 CDC23Q9UJX2 597 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
SEC16A-206ENST00000431893 ARPP19P56211 112 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 GRAMD1BQ3KR37 738 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 ZBTB8OSQ8IWT0 167 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 PARD6BQ9BYG5 372 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 GLT8D2Q9H1C3 349 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 HAUS4Q9H6D7 363 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 TNKSO95271 1327 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 TNRQ92752 1358 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 AOX1Q06278 1338 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 H7C1D1 291 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 GCKRQ14397 625 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 LRRC23Q53EV4 343 aaPredicted RBP12.4□□□□□ -0.42
SEC16A-206ENST00000431893 SCARA5Q6ZMJ2 495 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 POLR2MP0CAP2 368 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 LMNB1P20700 586 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 HSPH1Q92598 858 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 TEKT3Q9BXF9 490 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 DAAM1Q9Y4D1 1078 aa12.4□□□□□ -0.42
SEC16A-206ENST00000431893 KDM5BQ9UGL1 1544 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms