RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 UMODL1Q5DID0 1318 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 CFBP00751 764 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 TMEM240Q5SV17 173 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 NCOA7Q8NI08 942 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 NSUN6Q8TEA1 469 aaKnown RBP25.98■■□□□ 1.75
MSH6-202ENST00000411819 RMDN3Q96TC7 470 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 MTG1Q9BT17 334 aaPredicted RBP25.98■■□□□ 1.75
MSH6-202ENST00000411819 MAD2L2Q9UI95 211 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 KIAA1217Q5T5P2 1943 aa25.98■■□□□ 1.75
MSH6-202ENST00000411819 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.97■■□□□ 1.75
MSH6-202ENST00000411819 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.97■■□□□ 1.75
MSH6-202ENST00000411819 E7EWF7 191 aa25.97■■□□□ 1.75
MSH6-202ENST00000411819 SART3Q15020 963 aaKnown RBP25.97■■□□□ 1.75
MSH6-202ENST00000411819 FAM47CQ5HY64 1035 aa25.97■■□□□ 1.75
MSH6-202ENST00000411819 SEPT14Q6ZU15 432 aa25.97■■□□□ 1.75
MSH6-202ENST00000411819 HOMER1Q86YM7 354 aa25.97■■□□□ 1.75
MSH6-202ENST00000411819 ALDH8A1Q9H2A2 487 aaPredicted RBP25.97■■□□□ 1.75
MSH6-202ENST00000411819 TTYH1Q9H313 450 aaPredicted RBP25.97■■□□□ 1.75
MSH6-202ENST00000411819 SEMA6BQ9H3T3 888 aa25.97■■□□□ 1.75
MSH6-202ENST00000411819 TAF6LQ9Y6J9 622 aa25.97■■□□□ 1.75
MSH6-202ENST00000411819 ARIH2O95376 493 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 EIF2AK2P19525 551 aaKnown RBP25.96■■□□□ 1.75
MSH6-202ENST00000411819 CCL23P55773 120 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 WTAPQ15007 396 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 ARHGEF16Q5VV41 709 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 ZNF365Q70YC5 407 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 C16orf59Q7L2K0 433 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 CHST3Q7LGC8 479 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 CDX2Q99626 313 aaPredicted RBP25.96■■□□□ 1.75
MSH6-202ENST00000411819 NOC4LQ9BVI4 516 aaKnown RBP25.96■■□□□ 1.75
MSH6-202ENST00000411819 IL23AQ9NPF7 189 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 SCN10AQ9Y5Y9 1956 aa25.96■■□□□ 1.75
MSH6-202ENST00000411819 ZBTB5O15062 677 aa25.95■■□□□ 1.74
MSH6-202ENST00000411819 DNAJB2P25686 324 aa25.95■■□□□ 1.74
MSH6-202ENST00000411819 GRM4Q14833 912 aa25.95■■□□□ 1.74
MSH6-202ENST00000411819 STXBP2Q15833 593 aa25.95■■□□□ 1.74
MSH6-202ENST00000411819 STOX1Q6ZVD7 989 aa25.95■■□□□ 1.74
MSH6-202ENST00000411819 TRMT13Q9NUP7 481 aaKnown RBP25.95■■□□□ 1.74
MSH6-202ENST00000411819 PALM3A6NDB9 673 aaPredicted RBP25.94■■□□□ 1.74
MSH6-202ENST00000411819 IWS1Q96ST2 819 aa25.94■■□□□ 1.74
MSH6-202ENST00000411819 SENP2Q9HC62 589 aa25.94■■□□□ 1.74
MSH6-202ENST00000411819 PCDHA1Q9Y5I3 950 aa25.94■■□□□ 1.74
MSH6-202ENST00000411819 RBM8AQ9Y5S9 174 aaKnown RBP25.94■■□□□ 1.74
MSH6-202ENST00000411819 BAZ2BQ9UIF8 2168 aaKnown RBP25.93■■□□□ 1.74
MSH6-202ENST00000411819 TMEM265A0A087WTH1 108 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 A6NJR5 290 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 PPP1R11O60927 126 aaPredicted RBP25.93■■□□□ 1.74
MSH6-202ENST00000411819 SUPT20HL2P0C7V6 817 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 CHMP4BP1P59074 171 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 LY6KQ17RY6 165 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 TMEM67Q5HYA8 995 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 PPP1R13LQ8WUF5 828 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 MYLIPQ8WY64 445 aa25.93■■□□□ 1.74
MSH6-202ENST00000411819 KPNA6O60684 536 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 GH1P01241 217 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 CYP2C9P11712 490 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 NBPF20Q3BBV1 942 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 MAP4K1Q92918 833 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 MTMR8Q96EF0 704 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 PIGSQ96S52 555 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 WNT8AQ9H1J5 351 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 MTIF3Q9H2K0 278 aaKnown RBP25.92■■□□□ 1.74
MSH6-202ENST00000411819 PXMP2Q9NR77 195 aa25.92■■□□□ 1.74
MSH6-202ENST00000411819 OPLAHO14841 1288 aa25.91■■□□□ 1.74
MSH6-202ENST00000411819 HSD17B4P51659 736 aa25.91■■□□□ 1.74
MSH6-202ENST00000411819 CCDC62Q6P9F0 684 aa25.91■■□□□ 1.74
MSH6-202ENST00000411819 CATIPQ7Z7H3 387 aa25.91■■□□□ 1.74
MSH6-202ENST00000411819 AFG1LQ8WV93 481 aa25.91■■□□□ 1.74
MSH6-202ENST00000411819 SCLYQ96I15 445 aa25.91■■□□□ 1.74
MSH6-202ENST00000411819 GRXCR1A8MXD5 290 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 FGBP02675 491 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 NR3C2P08235 984 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 HOXA13P31271 388 aaPredicted RBP25.9■■□□□ 1.74
MSH6-202ENST00000411819 ANTXR2P58335 489 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 RASIP1Q5U651 963 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 OTOP2Q7RTS6 562 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 MB21D2Q8IYB1 491 aaPredicted RBP25.9■■□□□ 1.74
MSH6-202ENST00000411819 TIFAQ96CG3 184 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 MRVI1Q9Y6F6 885 aa25.9■■□□□ 1.74
MSH6-202ENST00000411819 MMP3P08254 477 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 MYCLP12524 364 aaPredicted RBP25.89■■□□□ 1.74
MSH6-202ENST00000411819 FOSL2P15408 326 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 ARHGAP1Q07960 439 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 TROAPQ12815 778 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 TRAF1Q13077 416 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 SLC35G1Q2M3R5 365 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 NFRKBQ6P4R8 1299 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 HERVK_113Q902F9 699 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 RIOX1Q9H6W3 641 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 NOD1Q9Y239 953 aa25.89■■□□□ 1.74
MSH6-202ENST00000411819 CDH23Q9H251 3354 aa25.89■■□□□ 1.73
MSH6-202ENST00000411819 EIF3JO75822 258 aaKnown RBP25.88■■□□□ 1.73
MSH6-202ENST00000411819 GHRHRQ02643 423 aa25.88■■□□□ 1.73
MSH6-202ENST00000411819 CASC1Q6TDU7 716 aa25.88■■□□□ 1.73
MSH6-202ENST00000411819 MAFAQ8NHW3 353 aaPredicted RBP25.88■■□□□ 1.73
MSH6-202ENST00000411819 PIBF1Q8WXW3 757 aa25.88■■□□□ 1.73
MSH6-202ENST00000411819 PBX4Q9BYU1 374 aa25.88■■□□□ 1.73
MSH6-202ENST00000411819 MAP3K20Q9NYL2 800 aaKnown RBP25.88■■□□□ 1.73
MSH6-202ENST00000411819 CXXC1Q9P0U4 656 aaPredicted RBP25.88■■□□□ 1.73
MSH6-202ENST00000411819 GBF1Q92538 1859 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms