RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SLC30A10Q6XR72 485 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 TMEM179Q6ZVK1 233 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 REXO1L1PQ8IX06 675 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 ACER1Q8TDN7 264 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 MYMKA6NI61 221 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 GYPCP04921 128 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 ANKRD40Q6AI12 368 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 FCHSD1Q86WN1 690 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 LRRN4CLQ8ND94 238 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 HAS1Q92839 578 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
SREBF1-204ENST00000395756 URI1O94763 535 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-204ENST00000395756 RHOBTB3O94955 611 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 GNG11P61952 73 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 TATDN1Q6P1N9 297 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 GIMAP8Q8ND71 665 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-204ENST00000395756 POLD4Q9HCU8 107 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 BLOC1S4Q9NUP1 217 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 NYAP2Q9P242 653 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 PRR16Q569H4 304 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 GLIS3Q8NEA6 775 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 LARP4BQ92615 738 aaKnown RBP20.03■□□□□ 0.8
SREBF1-204ENST00000395756 CCDC47Q96A33 483 aaKnown RBP20.03■□□□□ 0.8
SREBF1-204ENST00000395756 P2RX7Q99572 595 aaKnown RBP20.03■□□□□ 0.8
SREBF1-204ENST00000395756 TMEM39BQ9GZU3 492 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 ZHX3Q9H4I2 956 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 LRRC37AA6NMS7 1700 aa20.03■□□□□ 0.8
SREBF1-204ENST00000395756 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
SREBF1-204ENST00000395756 STX10O60499 249 aa20.02■□□□□ 0.8
SREBF1-204ENST00000395756 NCBP1Q09161 790 aaKnown RBP20.02■□□□□ 0.8
SREBF1-204ENST00000395756 CT47A1Q5JQC4 288 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-204ENST00000395756 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-204ENST00000395756 PCMTD1Q96MG8 357 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-204ENST00000395756 MAGEC2Q9UBF1 373 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-204ENST00000395756 H7C1D1 291 aa20.02■□□□□ 0.8
SREBF1-204ENST00000395756 HDLBPQ00341 1268 aaKnown RBP20.02■□□□□ 0.8
SREBF1-204ENST00000395756 AMPD3Q01432 767 aa20.02■□□□□ 0.8
SREBF1-204ENST00000395756 RAD9BQ6WBX8 426 aa20.02■□□□□ 0.8
SREBF1-204ENST00000395756 RAB34Q9BZG1 259 aa20.02■□□□□ 0.8
SREBF1-204ENST00000395756 SHTN1A0MZ66 631 aa20.02■□□□□ 0.79
SREBF1-204ENST00000395756 B4DLN1 442 aa20.02■□□□□ 0.79
SREBF1-204ENST00000395756 ZSCAN12O43309 604 aa20.02■□□□□ 0.79
SREBF1-204ENST00000395756 ZBTB7AO95365 584 aa20.02■□□□□ 0.79
SREBF1-204ENST00000395756 ETF1P62495 437 aaKnown RBP20.02■□□□□ 0.79
SREBF1-204ENST00000395756 CCDC174Q6PII3 467 aa20.02■□□□□ 0.79
SREBF1-204ENST00000395756 FANCGO15287 622 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 UBXN2AP68543 259 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 MRIQ9BWK5 157 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 ANO3Q9BYT9 981 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 LIMA1Q9UHB6 759 aaKnown RBP20.01■□□□□ 0.79
SREBF1-204ENST00000395756 E9PMD0 336 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 TPM1P09493 284 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 BMP3P12645 472 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
SREBF1-204ENST00000395756 KCNB1Q14721 858 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 RSBN1LQ6PCB5 846 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-204ENST00000395756 MKL1Q969V6 931 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 KIAA1024Q9UPX6 916 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 MYO3BQ8WXR4 1341 aa20.01■□□□□ 0.79
SREBF1-204ENST00000395756 CTIFO43310 598 aaKnown RBP20■□□□□ 0.79
SREBF1-204ENST00000395756 CLK2P49760 499 aaKnown RBP20■□□□□ 0.79
SREBF1-204ENST00000395756 KLK7P49862 253 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 KIAA1755Q5JYT7 1200 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 FBXO11Q86XK2 927 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 KIAA0895Q8NCT3 520 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 CYP2W1Q8TAV3 490 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 DDX12PQ92771 950 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 MRPL44Q9H9J2 332 aaKnown RBP20■□□□□ 0.79
SREBF1-204ENST00000395756 NPHP3-ACAD11A0A0J9YXS1 232 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 SPDYE2BA6NHP3 402 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 MFAP3LO75121 409 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 SPDYE6P0CI01 402 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 KRT9P35527 623 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 PBX1P40424 430 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 CCDC93Q567U6 631 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 TRIM65Q6PJ69 517 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 DCAF4Q8WV16 495 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 TBC1D5Q92609 795 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 KIFC2Q96AC6 838 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 WDR24Q96S15 920 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 AMNQ9BXJ7 453 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 ATF5Q9Y2D1 282 aaPredicted RBP20■□□□□ 0.79
SREBF1-204ENST00000395756 MEIS1O00470 390 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 DUSP9Q99956 384 aaKnown RBP20■□□□□ 0.79
SREBF1-204ENST00000395756 C7orf25Q9BPX7 421 aa20■□□□□ 0.79
SREBF1-204ENST00000395756 ZNF70Q9UC06 446 aaPredicted RBP20■□□□□ 0.79
SREBF1-204ENST00000395756 MEIS2O14770 477 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 MTIF2P46199 727 aaKnown RBP19.99■□□□□ 0.79
SREBF1-204ENST00000395756 FXR2P51116 673 aaKnown RBP eCLIP19.99■□□□□ 0.79
SREBF1-204ENST00000395756 SPAG1Q07617 926 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 FAM83BQ5T0W9 1011 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 SYDE2Q5VT97 1194 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 TTI2Q6NXR4 508 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 PDCL2Q8N4E4 241 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 ACRBPQ8NEB7 543 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 P2RX5Q93086 422 aa19.99■□□□□ 0.79
SREBF1-204ENST00000395756 POTEB3A0JP26 581 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms