RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ROBO3Q96MS0 1386 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 ANO9A1A5B4 782 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 FCER1AP12319 257 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 MAP9Q49MG5 647 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 FAM114A1Q8IWE2 563 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 AK8Q96MA6 479 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 PCMTD1Q96MG8 357 aaPredicted RBP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 C7orf25Q9BPX7 421 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 NOC4LQ9BVI4 516 aaKnown RBP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 MYH10P35580 1976 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 RNF40O75150 1001 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 IPO7O95373 1038 aaKnown RBP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 OR52Z1P0C646 297 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 ASIC1P78348 528 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 SRLQ86TD4 932 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 C2CD5Q86YS7 1000 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 ZSCAN29Q8IWY8 852 aaPredicted RBP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 CCDC47Q96A33 483 aaKnown RBP20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 ERGIC2Q96RQ1 377 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 MKNK2Q9HBH9 465 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
PCDHA1-202ENST00000394633 CDK5RAP2Q96SN8 1893 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 MYO1CO00159 1063 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 ZNF263O14978 683 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 ZMYND10O75800 440 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 PRPF6O94906 941 aaKnown RBP20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 IVLP07476 585 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 CDK17Q00537 523 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 FIGNQ5HY92 759 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 FOXR1Q6PIV2 292 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 SH3RF3Q8TEJ3 882 aaPredicted RBP20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 SLX4Q8IY92 1834 aa20.44■□□□□ 0.86
PCDHA1-202ENST00000394633 A0A1W2PQJ5 194 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 MACROD2A1Z1Q3 448 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 TSPY3P0CV98 308 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 TSPY8P0CW00 308 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 MYBL2P10244 700 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 IDEP14735 1019 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 VAV2P52735 878 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 SLC44A5Q8NCS7 719 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 TBC1D16Q8TBP0 767 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 COG1Q8WTW3 980 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 TMEM47Q9BQJ4 181 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 CPVLQ9H3G5 476 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 GGA1Q9UJY5 639 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 NT5C2P49902 561 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 LETM2Q2VYF4 491 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 GSPT2Q8IYD1 628 aaKnown RBP20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 HPS3Q969F9 1004 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 ZMYND12Q9H0C1 365 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 RRP15Q9Y3B9 282 aaKnown RBP20.43■□□□□ 0.86
PCDHA1-202ENST00000394633 CCNT1O60563 726 aaKnown RBP20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 PLEKP08567 350 aaPredicted RBP20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 C2orf54Q08AI8 447 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 SPTY2D1Q68D10 685 aaPredicted RBP20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 KRT26Q7Z3Y9 468 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 SP8Q8IXZ3 490 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 KIAA0895Q8NCT3 520 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 SECISBP2LQ93073 1101 aaKnown RBP20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 MMTAG2Q9BU76 263 aaKnown RBP20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 SEMA6BQ9H3T3 888 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 LRWD1Q9UFC0 647 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 TRIM66O15016 1216 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 KIF5AQ12840 1032 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 LRRC31Q6UY01 552 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 KRT25Q7Z3Z0 450 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 GDAP1L1Q96MZ0 367 aa20.42■□□□□ 0.86
PCDHA1-202ENST00000394633 ZBTB7AO95365 584 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 PPP1R2P41236 205 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 NAPAP54920 295 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 NONOQ15233 471 aaKnown RBP eCLIP20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 CCNI2Q6ZMN8 369 aaPredicted RBP20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 SMCR8Q8TEV9 937 aaPredicted RBP20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 JADE2Q9NQC1 790 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 STX8Q9UNK0 236 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 KLRF2D3W0D1 207 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 ALDH1B1P30837 517 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 TECP42680 631 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 COBLL1Q53SF7 1204 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 FKBP15Q5T1M5 1219 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 ZNF444Q8N0Y2 327 aaPredicted RBP20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 AFAP1L1Q8TED9 768 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 RIN2Q8WYP3 895 aaPredicted RBP20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 TSGA10Q9BZW7 698 aa20.41■□□□□ 0.86
PCDHA1-202ENST00000394633 H0YIN7 160 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 C6orf229H3BNL8 230 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 RASA1P20936 1047 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 ATP2B4P23634 1241 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 C10orf67Q8IYJ2 551 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 ZFP91Q96JP5 570 aaPredicted RBP20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 CCDC42Q96M95 316 aa20.4■□□□□ 0.86
PCDHA1-202ENST00000394633 LZTS2Q9BRK4 669 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms