RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CEP83Q9Y592 693 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 PCDHA1Q9Y5I3 950 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 COL4A3BPQ9Y5P4 624 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 ANTXR2P58335 489 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 DNAI2Q9GZS0 605 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 SH2D4AQ9H788 454 aa13.98□□□□□ -0.17
DNMT3A-204ENST00000380756 CPDO75976 1380 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 DDX39AO00148 427 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 CYP4A11Q02928 519 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 ZYXQ15942 572 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 FAM196AQ6ZSG2 479 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 PIGSQ96S52 555 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 BZW2Q9Y6E2 419 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 ADAT2Q7Z6V5 191 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■■□□□ 14.1
DNMT3A-204ENST00000380756 PCDHA13Q9Y5I0 950 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 SPATA31A3Q5VYP0 1347 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 TTC26A0AVF1 554 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 GAS7O60861 476 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 FMR1Q06787 632 aaKnown RBP eCLIP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 NAA25Q14CX7 972 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 PFKFB3Q16875 520 aaPredicted RBP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 NAA35Q5VZE5 725 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 IGDCC4Q8TDY8 1250 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-204ENST00000380756 FTCDO95954 541 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 ATP2B4P23634 1241 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 GKAP1Q5VSY0 366 aaPredicted RBP13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 SRGAP2O75044 1071 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 FAM178BQ8IXR5 827 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 TEKT1Q969V4 418 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 ST7Q9NRC1 585 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 PABPC4Q13310 644 aaKnown RBP eCLIP13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 TRIM7Q9C029 511 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 PARP2Q9UGN5 583 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 EXOC7Q9UPT5 735 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
DNMT3A-204ENST00000380756 VWDEQ8N2E2 1590 aa13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 GAS8O95995 478 aa13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 MXRA7P84157 204 aa13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 SLC7A5Q01650 507 aa13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 GPATCH4Q5T3I0 446 aaKnown RBP13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 MCTP2Q6DN12 878 aa13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 COA7Q96BR5 231 aa13.96□□□□□ -0.18
DNMT3A-204ENST00000380756 BAIAP2L1Q9UHR4 511 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 MYO1CO00159 1063 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 FRMPD1Q5SYB0 1578 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 KRT27Q7Z3Y8 459 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 BSDC1Q9NW68 430 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 A0A1B0GTH6 734 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 CYP2D6P10635 497 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 GCFC2P16383 781 aaKnown RBP13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 FERMT1Q9BQL6 677 aa13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
DNMT3A-204ENST00000380756 MROH7-TTC4A0A0A0MT08 1334 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 ATP2A2P16615 1042 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 MRPS25P82663 173 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 EMBQ6PCB8 327 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 ADAMTS1Q9UHI8 967 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 XDHP47989 1333 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 A0A087WUV0 522 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 PRDX5P30044 214 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 LIN9Q5TKA1 542 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 CEP128Q6ZU80 1094 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 FBXO11Q86XK2 927 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 TC2NQ8N9U0 490 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 SH3GLB2Q9NR46 395 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 HOMER3Q9NSC5 361 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 NMT2O60551 498 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 UHMK1Q8TAS1 419 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 PGRMC1O00264 195 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 ST3GAL1Q11201 340 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 GPR162Q16538 588 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 SLFN13Q68D06 897 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 CPXCR1Q8N123 301 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 FLAD1Q8NFF5 587 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 STIM2Q9P246 746 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 LARSQ9P2J5 1176 aaKnown RBP13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 HPS5Q9UPZ3 1129 aa13.94□□□□□ -0.18
DNMT3A-204ENST00000380756 CEP170BQ9Y4F5 1589 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms