RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 GSTA1P08263 222 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 PHEXP78562 749 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 RILPQ96NA2 401 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 ANKRD27Q96NW4 1050 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 CHP1Q99653 195 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 TCEAL9Q9UHQ7 104 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 USP15Q9Y4E8 981 aaPredicted RBP11.17□□□□□ -0.62
CD28-202ENST00000374481 ZFYVE9O95405 1425 aa11.17□□□□□ -0.62
CD28-202ENST00000374481 SPOPO43791 374 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 GTPBP6O43824 516 aaPredicted RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 DNAJC6O75061 913 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 CARSP49589 748 aaKnown RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
CD28-202ENST00000374481 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 SKOR1P84550 965 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 EIF4A2Q14240 407 aaKnown RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 KCNV1Q6PIU1 500 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 THEMISQ8N1K5 641 aaPredicted RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 OR2W6PQ8NHA6 318 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 AP1M1Q9BXS5 423 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 ARL2BPQ9Y2Y0 163 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 A0A1B0GTH6 734 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 THAP12O43422 761 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 SUPT3HO75486 399 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 MTHFSDQ2M296 383 aaKnown RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 ANKRD20A2Q5SQ80 823 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 ANKRD20A1Q5TYW2 823 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 MAEAQ7L5Y9 396 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 TUBB6Q9BUF5 446 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 CSRNP2Q9H175 543 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 HDAC9Q9UKV0 1011 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 SLC4A4Q9Y6R1 1079 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 TTC26A0AVF1 554 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 DYTNA2CJ06 578 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 MLXIPLQ9NP71 852 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 CDC42BPAQ5VT25 1732 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 NCK2O43639 380 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 UBTFL6P0CB48 400 aaPredicted RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 GHRP10912 638 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 ESRRAP11474 423 aaPredicted RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 HSPA1LP34931 641 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 CDR2Q01850 454 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 LRRC14Q15048 493 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 CWF19L1Q69YN2 538 aaKnown RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 CRELD2Q6UXH1 353 aaPredicted RBP11.16□□□□□ -0.62
CD28-202ENST00000374481 LRIG3Q6UXM1 1119 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 MMGT1Q8N4V1 131 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 LZICQ8WZA0 190 aa11.16□□□□□ -0.62
CD28-202ENST00000374481 UBN2Q6ZU65 1347 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 CD109Q6YHK3 1445 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 MAGEA13PA6NCF6 341 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 GAS8O95995 478 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 TFRCP02786 760 aaKnown RBP11.15□□□□□ -0.62
CD28-202ENST00000374481 CHN1P15882 459 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 IL13P35225 146 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 PSMD6Q15008 389 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 RESP18Q5W5W9 173 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 TTLL7Q6ZT98 887 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 WAPLQ7Z5K2 1190 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 ANKLE2Q86XL3 938 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 AGGF1Q8N302 714 aaeCLIP11.15□□□□□ -0.62
CD28-202ENST00000374481 MB21D1Q8N884 522 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 RAPGEF5Q92565 580 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.62
CD28-202ENST00000374481 DMGDHQ9UI17 866 aaKnown RBP11.15□□□□□ -0.62
CD28-202ENST00000374481 PRDM15P57071 1507 aaPredicted RBP11.15□□□□□ -0.62
CD28-202ENST00000374481 ABCA8O94911 1581 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 RPN1P04843 607 aaKnown RBP11.15□□□□□ -0.62
CD28-202ENST00000374481 PHBP35232 272 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 ESRRGP62508 458 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 NR1I3Q14994 352 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 GRAMD1BQ3KR37 738 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 TRAPPC11Q7Z392 1133 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 PBKQ96KB5 322 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 SIKE1Q9BRV8 207 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 RWDD2AQ9UIY3 292 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 TRPM1Q7Z4N2 1603 aa11.15□□□□□ -0.62
CD28-202ENST00000374481 I3L4J1 428 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 OPLAHO14841 1288 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 COPS2P61201 443 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 PLCB3Q01970 1234 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 BYSLQ13895 437 aaKnown RBP11.15□□□□□ -0.63
CD28-202ENST00000374481 TNNI3KQ59H18 835 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.63
CD28-202ENST00000374481 MPHOSPH6Q99547 160 aaKnown RBP11.15□□□□□ -0.63
CD28-202ENST00000374481 SATB2Q9UPW6 733 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.63
CD28-202ENST00000374481 IRF6O14896 467 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 CALML3P27482 149 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 CNOT6LQ96LI5 555 aaKnown RBP11.14□□□□□ -0.63
CD28-202ENST00000374481 TTC1Q99614 292 aa11.14□□□□□ -0.63
CD28-202ENST00000374481 PRMT1Q99873 361 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms