RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TEX35Q5T0J7 233 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 MMS22LQ6ZRQ5 1243 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 NYAP1Q6ZVC0 841 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 SLAIN1Q8ND83 568 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 SPATC1LQ9H0A9 340 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 ZSCAN16Q9H4T2 348 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-204ENST00000369530 RBM27Q9P2N5 1060 aaKnown RBP7.85□□□□□ -1.15
CSDE1-204ENST00000369530 PHF24Q9UPV7 400 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 HAS3O00219 553 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 SH2B2O14492 632 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-204ENST00000369530 GJB1P08034 283 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 LIFRP42702 1097 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 GYS2P54840 703 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 VPS37DQ86XT2 251 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 RPAP3Q9H6T3 665 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-204ENST00000369530 L2HGDHQ9H9P8 463 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 Q9Y3F1 56 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 PLXNA3P51805 1871 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 TRIM66O15016 1216 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 TTLL1O95922 423 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 TOB2Q14106 344 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-204ENST00000369530 HIC1Q14526 733 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 PPM1EQ8WY54 764 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.84□□□□□ -1.159e-6■□□□□ 8.3
CSDE1-204ENST00000369530 F5H6K3 240 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 NEFHP12036 1026 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 CORO7P57737 925 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 KLRC3Q07444 240 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 ZSCAN26Q16670 478 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 TRIM71Q2Q1W2 868 aaKnown RBP7.84□□□□□ -1.15
CSDE1-204ENST00000369530 GPATCH3Q96I76 525 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 DEF6Q9H4E7 631 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 AS3MTQ9HBK9 375 aa7.84□□□□□ -1.15
CSDE1-204ENST00000369530 E7EWF7 191 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 ICAM1P05362 532 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 IVLP07476 585 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 NF2P35240 595 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 CTDSPL2Q05D32 466 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 MAP2K5Q13163 448 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 CCL14Q16627 93 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 ZC3H12AQ5D1E8 599 aaKnown RBP7.84□□□□□ -1.16
CSDE1-204ENST00000369530 ANKRD33Q7Z3H0 272 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.84□□□□□ -1.16
CSDE1-204ENST00000369530 REXO1L1PQ8IX06 675 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 TRMT44Q8IYL2 757 aaKnown RBP7.84□□□□□ -1.16
CSDE1-204ENST00000369530 KCNN1Q92952 543 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 USP26Q9BXU7 913 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 CSADQ9Y600 493 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 C5orf42Q9H799 3197 aa7.84□□□□□ -1.16
CSDE1-204ENST00000369530 CNTNAP5Q8WYK1 1306 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 IGKV6D-21A0A0A0MT36 114 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 SLC27A2O14975 620 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 IDH1O75874 414 aaKnown RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 LIG1P18858 919 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 MAPK4P31152 587 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 PICALMQ13492 652 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 APBA2Q99767 749 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 FEM1BQ9UK73 627 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 PNMA6AP0CW24 399 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 FDX1P10109 184 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 ERCC3P19447 782 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 MTFR1Q15390 333 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 FOXD4L5Q5VV16 416 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 KRBA2Q6ZNG9 492 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 C17orf53Q8N3J3 647 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 LINC01465Q8N7H1 131 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 CCDC112Q8NEF3 446 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 SOCS4Q8WXH5 440 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 FOXD4L4Q8WXT5 416 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 GDF15Q99988 308 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 MROH8Q9H579 483 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 CYP39A1Q9NYL5 469 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 BRD1O95696 1058 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 COG2Q14746 738 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 ADCK5Q3MIX3 580 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 TMEM63BQ5T3F8 832 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 LRCH2Q5VUJ6 765 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 JMJD4Q9H9V9 463 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 ZSWIM6Q9HCJ5 1215 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 MCM9Q9NXL9 1143 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 MAP3K20Q9NYL2 800 aaKnown RBP7.83□□□□□ -1.16
CSDE1-204ENST00000369530 CPA4Q9UI42 421 aa7.83□□□□□ -1.16
CSDE1-204ENST00000369530 DENND4CQ5VZ89 1909 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 MEIS2O14770 477 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 STRNO43815 780 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 STBD1O95210 358 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 IRX1P78414 480 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-204ENST00000369530 TKFCQ3LXA3 575 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 TYW1BQ6NUM6 668 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 SPZ1Q9BXG8 430 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 TM6SF1Q9BZW5 370 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 FBXO28Q9NVF7 368 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 COQ9O75208 318 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 SGPL1O95470 568 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 EFEMP2O95967 443 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 GJA9P57773 515 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 COL19A1Q14993 1142 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 LENG9Q96B70 501 aa7.82□□□□□ -1.16
CSDE1-204ENST00000369530 ATG4CQ96DT6 458 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms