RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 KRT86O43790 486 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 NDUFA10O95299 355 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 AKR1B1P15121 316 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 CYP3A7P24462 503 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 HNRNPH3P31942 346 aaKnown RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 SHMT1P34896 483 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 TECP42680 631 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 TXKP42681 527 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 GOLGA8FQ08AF8 430 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 GOLGA8DPQ0D2H9 430 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 TBC1D8BQ0IIM8 1120 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 KIF4BQ2VIQ3 1234 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 FAM182BQ5T319 152 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 ADGRF4Q8IZF3 695 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 SUPT20HQ8NEM7 779 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 ERMNQ8TAM6 284 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 CNOT6LQ96LI5 555 aaKnown RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 WDR24Q96S15 920 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 DUSP9Q99956 384 aaKnown RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 JMJD4Q9H9V9 463 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 VAT1LQ9HCJ6 419 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 LUC7LQ9NQ29 371 aaKnown RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 BIN2Q9UBW5 565 aaPredicted RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 DDX25Q9UHL0 483 aaKnown RBP11.4□□□□□ -0.58
TPM3-209ENST00000368527 SERPINA10Q9UK55 444 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 ANO9A1A5B4 782 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 PP2D1A8MPX8 630 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 EIF3CLB5ME19 914 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 PSMD14O00487 310 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 ADAMTS3O15072 1205 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 CHMP4BP1P59074 171 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 CBX1P83916 185 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 CKAP4Q07065 602 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 DMTNQ08495 405 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 GPS2Q13227 327 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 GRB10Q13322 594 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 PICALMQ13492 652 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 MAN2A1Q16706 1144 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 CCDC96Q2M329 555 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 ZNF569Q5MCW4 686 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 HAUS3Q68CZ6 603 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 IQCEQ6IPM2 695 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 CDC42EP5Q6NZY7 148 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 TMEM179Q6ZVK1 233 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 CEP63Q96MT8 703 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 MBOAT7Q96N66 472 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 EIF3CQ99613 913 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 DESI2Q9BSY9 194 aa11.39□□□□□ -0.59
TPM3-209ENST00000368527 MMTAG2Q9BU76 263 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 NOC4LQ9BVI4 516 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 MRPL44Q9H9J2 332 aaKnown RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 GREB1LQ9C091 1923 aaPredicted RBP11.39□□□□□ -0.59
TPM3-209ENST00000368527 PITPNM2Q9BZ72 1349 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 TTC26A0AVF1 554 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 PES1O00541 588 aaKnown RBP11.38□□□□□ -0.59
TPM3-209ENST00000368527 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 ENTPD3O75355 529 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 ZRANB2O95218 330 aaKnown RBP eCLIP11.38□□□□□ -0.59
TPM3-209ENST00000368527 CDC25AP30304 524 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 CRKP46108 304 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 TNNI2P48788 182 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 ERVK-24P63145 666 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 APOBEC3HQ6NTF7 200 aaKnown RBP11.38□□□□□ -0.59
TPM3-209ENST00000368527 RUBCNQ92622 972 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 TTYH3Q9C0H2 523 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 GPCPD1Q9NPB8 672 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 LZTFL1Q9NQ48 299 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 PCDHA12Q9UN75 941 aa11.38□□□□□ -0.59
TPM3-209ENST00000368527 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
TPM3-209ENST00000368527 FRMPD2Q68DX3 1309 aaPredicted RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 MYH8P13535 1937 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 CTAGE15A4D2H0 777 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 MPHOSPH10O00566 681 aaKnown RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 USO1O60763 962 aaKnown RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 CTAGE8P0CG41 777 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 CLCN6P51797 869 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 EHHADHQ08426 723 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 STK4Q13043 487 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 NAA30Q147X3 362 aaPredicted RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 MTF1Q14872 753 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 SPA17Q15506 151 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
TPM3-209ENST00000368527 VWA3BQ502W6 1294 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 TEX35Q5T0J7 233 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 TATDN1Q6P1N9 297 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 CTAGE6Q86UF2 777 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 CTAGE4Q8IX94 777 aa11.37□□□□□ -0.59
TPM3-209ENST00000368527 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms