RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 EIF2AQ9BY44 585 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 NPEPPSP55786 919 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 FAM227BQ96M60 508 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TTKP33981 857 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 LRRC31Q6UY01 552 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MICU3Q86XE3 530 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 C2CD5Q86YS7 1000 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 LPIN2Q92539 896 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PCDHB13Q9Y5F0 798 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TCIRG1Q13488 830 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SPDL1Q96EA4 605 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 ANAPC4Q9UJX5 808 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CREB3O43889 395 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 NAB2Q15742 525 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 LMBR1LQ6UX01 489 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PCGF5Q86SE9 256 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 EAF2Q96CJ1 260 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 HAUS1Q96CS2 278 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 NDE1Q9NXR1 346 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SEPT3Q9UH03 358 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CLIC4Q9Y696 253 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TMEM232C9JQI7 657 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MAGOHBQ96A72 148 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 ZHX2Q9Y6X8 837 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MAP3K19Q56UN5 1328 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 USP11P51784 963 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 ROR2Q01974 943 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MEA1Q16626 185 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TC2NQ8N9U0 490 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PAGE5Q96GU1 130 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 DNAJC7Q99615 494 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MKNK2Q9HBH9 465 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PALD1Q9ULE6 856 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CHRM1P11229 460 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 EPB41L5Q9HCM4 733 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC22O60826 627 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PHBP35232 272 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MAP3K4Q9Y6R4 1608 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 NEK9Q8TD19 979 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC43Q96MW1 224 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ZMAT2Q96NC0 199 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 GOPCQ9HD26 462 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 LOC102724159A0A0B4J2E5 919 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 DKC1O60832 514 aaKnown RBP eCLIP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 XRCC5P13010 732 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 PWP2Q15269 919 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 DNM3Q9UQ16 869 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 IQSEC2Q5JU85 1478 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 A0A0D9SFI3 127 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 GPTP24298 496 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 AOC3Q16853 763 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 REXO1L1PQ8IX06 675 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 FRMD8P1Q9BZ68 369 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 VPS16Q9H269 839 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NOL3O60936 208 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 PNOCQ13519 176 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TOB2Q14106 344 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TYW1BQ6NUM6 668 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CENPUQ71F23 418 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 WDR24Q96S15 920 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 USP15Q9Y4E8 981 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 HSPA13P48723 471 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 LBRQ14739 615 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ENOSF1Q7L5Y1 443 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TMCO5AQ8N6Q1 288 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 AMOTL2Q9Y2J4 779 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 FOSP01100 380 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 SCG2P13521 617 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 IL17REQ8NFR9 667 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 C10orf88Q9H8K7 445 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 DENND2AQ9ULE3 1009 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 MYO3AQ8NEV4 1616 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 SMG5Q9UPR3 1016 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ORC4O43929 436 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CTNND1O60716 968 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 PTGDRQ13258 359 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NCOA5Q9HCD5 579 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 MIS18AQ9NYP9 233 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 SALL3Q9BXA9 1300 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 TMCC1O94876 653 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ITIH2P19823 946 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 FECHP22830 423 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ZBTB38Q8NAP3 1195 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 P2RX5Q93086 422 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CEP72Q9P209 647 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NSFL1CQ9UNZ2 370 aaKnown RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 CYP21A2P08686 494 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 MCM7P33993 719 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NAALADL2Q58DX5 795 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NCAPH2Q6IBW4 605 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 MIEF2Q96C03 454 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ZNF219Q9P2Y4 722 aaPredicted RBP4.48□□□□□ -1.69
SYNE2-204ENST00000358025 SORCS3Q9UPU3 1222 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 NEXMIFQ5QGS0 1516 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 GPAA1O43292 621 aa4.48□□□□□ -1.69
SYNE2-204ENST00000358025 ESRRBO95718 433 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms