RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 FAM184BQ9ULE4 1060 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 DHX29Q7Z478 1369 aaKnown RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 MRC2Q9UBG0 1479 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 HMGB2P26583 209 aaKnown RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 CLEC10AQ8IUN9 316 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 CFAP36Q96G28 342 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 HEMGNQ9BXL5 484 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 RAB20Q9NX57 234 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 SLC5A4Q9NY91 659 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 NKIRAS1Q9NYS0 192 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 BFSP1Q12934 665 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 C1orf228Q6PIY5 440 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 MYOCDQ8IZQ8 938 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 GBP7Q8N8V2 638 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 FANCBQ8NB91 859 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 MAGI1Q96QZ7 1491 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 GSPT1P15170 499 aaKnown RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 STMN2Q93045 179 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 FGD4Q96M96 766 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 UBE2TQ9NPD8 197 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 PIM2Q9P1W9 311 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 UHRF1BP1LA0JNW5 1464 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 STAM2O75886 525 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 ATXN7L3BQ96GX2 97 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 XPO4Q9C0E2 1151 aaKnown RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 ASMTLO95671 621 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 STAT3P40763 770 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 GTF2A1P52655 376 aaPredicted RBP8.04□□□□□ -1.12
VPS13A-202ENST00000357409 RPS6KA1Q15418 735 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 SFMBT2Q5VUG0 894 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 CYP4F22Q6NT55 531 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 METTL23Q86XA0 190 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 DPF3Q92784 378 aa8.04□□□□□ -1.12
VPS13A-202ENST00000357409 BASP1P80723 227 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 HADHQ16836 314 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 TTC25Q96NG3 672 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 OPA1O60313 960 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 STK10O94804 968 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 GFPT2O94808 682 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 FTCDO95954 541 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 BMP3P12645 472 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 NLRP11P59045 1033 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SCRN1Q12765 414 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SWSAP1Q6NVH7 229 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 FLT4P35916 1363 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SPTLC1O15269 473 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 NEK8Q86SG6 692 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 OTULINQ96BN8 352 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 FEZ2Q9UHY8 353 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 RIPOR2Q9Y4F9 1068 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 KIAA0232Q92628 1395 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 PLEKHA8P1O95397 391 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 EEF1GP26641 437 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 PCK1P35558 622 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 MMEL1Q495T6 779 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 PIGBQ92521 554 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SPON2Q9BUD6 331 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 VGLL3A8MV65 326 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SMIM24O75264 130 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 ENDOD1O94919 500 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 XRCC5P13010 732 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 PRPHP41219 470 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 CCDC93Q567U6 631 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 RAET1EQ8TD07 263 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 ELMO3Q96BJ8 720 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 AP1M1Q9BXS5 423 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SAMD15Q9P1V8 674 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 POLA1P09884 1462 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 RNF8O76064 485 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 HDAC1Q13547 482 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SEPT2Q15019 361 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SUPT20HL1Q3ZLR7 823 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SEZ6Q53EL9 994 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 CCDC33Q8N5R6 958 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 PDZD8Q8NEN9 1154 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 ANKRD36BP1Q96IX9 119 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 DDX41Q9UJV9 622 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SUFUQ9UMX1 484 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 A6NJR5 290 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SRGAP2O75044 1071 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 SRGAP2BP0DMP2 458 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 CFAP57Q96MR6 1250 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 NVLO15381 856 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 DMP1Q13316 513 aaPredicted RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 JADE1Q6IE81 842 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 CYP26C1Q6V0L0 522 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 CELF1Q92879 486 aaKnown RBP8.03□□□□□ -1.12
VPS13A-202ENST00000357409 MAST3O60307 1309 aa8.03□□□□□ -1.12
VPS13A-202ENST00000357409 IL6STP40189 918 aaPredicted RBP8.02□□□□□ -1.12
VPS13A-202ENST00000357409 YWHAGP61981 247 aaKnown RBP eCLIP8.02□□□□□ -1.12
VPS13A-202ENST00000357409 RILPL1Q5EBL4 403 aa8.02□□□□□ -1.12
VPS13A-202ENST00000357409 TWF2Q6IBS0 349 aaKnown RBP8.02□□□□□ -1.12
VPS13A-202ENST00000357409 KIAA1524Q8TCG1 905 aa8.02□□□□□ -1.12
VPS13A-202ENST00000357409 USP44Q9H0E7 712 aa8.02□□□□□ -1.12
VPS13A-202ENST00000357409 CCDC68Q9H2F9 335 aa8.02□□□□□ -1.12
VPS13A-202ENST00000357409 KANSL2Q9H9L4 492 aa8.02□□□□□ -1.12
VPS13A-202ENST00000357409 PLCB1Q9NQ66 1216 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms