RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IL31RAQ8NI17 732 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 PIBF1Q8WXW3 757 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 AP5M1Q9H0R1 490 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 ANO2Q9NQ90 1003 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 PNMA2Q9UL42 364 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 Q9Y3F1 56 aa19.47■□□□□ 0.71
PDLIM7-201ENST00000355572 DCDC2CA8MYV0 355 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 PLEKHA8P1O95397 391 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 RAG1P15918 1043 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 EIF2AK2P19525 551 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 PURAQ00577 322 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 GHRHRQ02643 423 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 ITGA7Q13683 1181 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 CCDC62Q6P9F0 684 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 C16orf59Q7L2K0 433 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 RASEFQ8IZ41 740 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 ZNF654Q8IZM8 581 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 CMTR1Q8N1G2 835 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 OR6J1Q8NGC5 347 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 PPP1R12CQ9BZL4 782 aa19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 MRPL11Q9Y3B7 192 aaKnown RBP19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 TRIP12Q14669 1992 aaPredicted RBP19.46■□□□□ 0.71
PDLIM7-201ENST00000355572 RGS20O76081 388 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 LY6KQ17RY6 165 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 ADCK5Q3MIX3 580 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 TCEANC2Q96MN5 208 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 RMDN3Q96TC7 470 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 TRPV6Q9H1D0 765 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 PXMP2Q9NR77 195 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 PCDHA1Q9Y5I3 950 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 TANC1Q9C0D5 1861 aa19.45■□□□□ 0.7
PDLIM7-201ENST00000355572 B4GALT4O60513 344 aa19.44■□□□□ 0.7
PDLIM7-201ENST00000355572 TXNP10599 105 aaKnown RBP19.44■□□□□ 0.7
PDLIM7-201ENST00000355572 PPP2R5BQ15173 497 aa19.44■□□□□ 0.7
PDLIM7-201ENST00000355572 SEPT14Q6ZU15 432 aa19.44■□□□□ 0.7
PDLIM7-201ENST00000355572 GPKOWQ92917 476 aaPredicted RBP eCLIP19.44■□□□□ 0.7
PDLIM7-201ENST00000355572 VWCEQ96DN2 955 aa19.44■□□□□ 0.7
PDLIM7-201ENST00000355572 ERICH2A1L162 156 aa19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 TIMP1P01033 207 aa19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 MYL3P08590 195 aa19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 CYP2C18P33260 490 aa19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 ARHGAP1Q07960 439 aa19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 SRBD1Q8N5C6 995 aaKnown RBP19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 SCFD2Q8WU76 684 aa19.43■□□□□ 0.7
PDLIM7-201ENST00000355572 LAMA2P24043 3122 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 NR3C2P08235 984 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 CSF2RAP15509 400 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 FPGSQ05932 587 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 FAM109BQ6ICB4 259 aaPredicted RBP19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 MCF2L2Q86YR7 1114 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 DEFB123Q8N688 67 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 NSUN6Q8TEA1 469 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.79e-10■■■□□ 15.9
PDLIM7-201ENST00000355572 PDCD2LQ9BRP1 358 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 BCAS3Q9H6U6 928 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 TRMT13Q9NUP7 481 aaKnown RBP19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 PTPRSQ13332 1948 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 TET1Q8NFU7 2136 aa19.42■□□□□ 0.7
PDLIM7-201ENST00000355572 PNMA6FA0A0J9YX94 578 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 hCG_1642624A0A1W2PR95 340 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 ACRP10323 421 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 SART3Q15020 963 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 ARHGEF16Q5VV41 709 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 MFSD5Q6N075 450 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 CATIPQ7Z7H3 387 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 AFG1LQ8WV93 481 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 WNT8AQ9H1J5 351 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 MTMR10Q9NXD2 777 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 MROH7Q68CQ1 1323 aa19.41■□□□□ 0.7
PDLIM7-201ENST00000355572 A6NJR5 290 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 SORBS3O60504 671 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 CDC45O75419 566 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 CABYRO75952 493 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 DDAH1O94760 285 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 MCM5P33992 734 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 TTLL4Q14679 1199 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 PGM5Q15124 567 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 FAM161BQ96MY7 647 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 NOC4LQ9BVI4 516 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 MAF1Q9H063 256 aa19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 ALDH8A1Q9H2A2 487 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 DDX41Q9UJV9 622 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-201ENST00000355572 NKRFO15226 690 aaKnown RBP eCLIP19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 MMP3P08254 477 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 CYP2C9P11712 490 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 MYCLP12524 364 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 CPA1P15085 419 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 EXOSC10Q01780 885 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 SP2Q02086 613 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 STXBP2Q15833 593 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 NBPF20Q3BBV1 942 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 TMEM240Q5SV17 173 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 GPR153Q6NV75 609 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 KAT2BQ92831 832 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 TMEM87BQ96K49 555 aa19.39■□□□□ 0.69
PDLIM7-201ENST00000355572 GUCD1Q96NT3 240 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms