RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CCDC112Q8NEF3 446 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 MED1Q15648 1581 aaPredicted RBP14.19□□□□□ -0.14
LIN54-201ENST00000340417 LAD1O00515 517 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 SCRN1Q12765 414 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 TBC1D10CQ8IV04 446 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 CENPHQ9H3R5 247 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 CPA4Q9UI42 421 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 INPP5FQ9Y2H2 1132 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 GCLCP48506 637 aaPredicted RBP14.19□□□□□ -0.14
LIN54-201ENST00000340417 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
LIN54-201ENST00000340417 CAMTA1Q9Y6Y1 1673 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 PLEKHA8P1O95397 391 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
LIN54-201ENST00000340417 ADGRF4Q8IZF3 695 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 TNFAIP3P21580 790 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 PAK1Q13153 545 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 LIN9Q5TKA1 542 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 URGCPQ8TCY9 931 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 DPF2Q92785 391 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 TRIM17Q9Y577 477 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 QRICH1Q2TAL8 776 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 ADCK5Q3MIX3 580 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.18□□□□□ -0.14
LIN54-201ENST00000340417 GCNAQ96QF7 691 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 CAMKK2Q96RR4 588 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 POSTNQ15063 836 aa14.18□□□□□ -0.14
LIN54-201ENST00000340417 ERCC3P19447 782 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 ZDHHC15Q96MV8 337 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 KATNAL1Q9BW62 490 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 ZNF302Q9NR11 478 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 MEIS1O00470 390 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 SLC9C1Q4G0N8 1177 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
LIN54-201ENST00000340417 MYOCDQ8IZQ8 938 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 CDCA5Q96FF9 252 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 ANKRD36BP1Q96IX9 119 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 GPR75-ASB3A0A0A6YYF3 556 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 TRAPPC10P48553 1259 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 PLEKHH3Q7Z736 793 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 PPP2R3CQ969Q6 453 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 CASQ1P31415 396 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 LONP1P36776 959 aaKnown RBP14.17□□□□□ -0.14
LIN54-201ENST00000340417 TNNC1P63316 161 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 NLGN2Q8NFZ4 835 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 TBC1D22BQ9NU19 505 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 POLIQ9UNA4 740 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 TAX1BP1Q86VP1 789 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 TMX1Q9H3N1 280 aa14.17□□□□□ -0.14
LIN54-201ENST00000340417 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 ZRSR2Q15696 482 aaKnown RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 USP17L6PQ6QN14 398 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 ST7Q9NRC1 585 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 NDUFB10O96000 172 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 LMBR1Q8WVP7 490 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 GOLGA6L9A6NEM1 432 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 ABCD1P33897 745 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 LRMPQ12912 555 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 JAKMIP2Q96AA8 810 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 CCDC42Q96M95 316 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 FOXP1Q9H334 677 aaPredicted RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 HESX1Q9UBX0 185 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 KIF20BQ96Q89 1820 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 WDR64B1ANS9 1081 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 BCRP11274 1271 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 ALX1Q15699 326 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 TMTC3Q6ZXV5 915 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 CACTINQ8WUQ7 758 aaKnown RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 CCDC127Q96BQ5 260 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 ROBO1Q9Y6N7 1651 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 CAPN9O14815 690 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 ORC4O43929 436 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 GRM4Q14833 912 aa14.16□□□□□ -0.14
LIN54-201ENST00000340417 ENAHQ8N8S7 591 aaPredicted RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 IPO4Q8TEX9 1081 aaKnown RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 CCDC94Q9BW85 323 aaPredicted RBP14.16□□□□□ -0.14
LIN54-201ENST00000340417 ZNF202O95125 648 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 IFNAR1P17181 557 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 OSTNP61366 133 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 KRT76Q01546 638 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 ADALQ6DHV7 355 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 MTMR4Q9NYA4 1195 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 PFASO15067 1338 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 RASEFQ8IZ41 740 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 GPRC5DQ9NZD1 345 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 MYO5BQ9ULV0 1848 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 MAPK4P31152 587 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 CAP2P40123 477 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 BAATQ14032 418 aaPredicted RBP14.15□□□□□ -0.14
LIN54-201ENST00000340417 NSMCE1Q8WV22 266 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 GLT1D1Q96MS3 346 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 SNX25Q9H3E2 840 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 SERTAD1Q9UHV2 236 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 CCDC85CA6NKD9 419 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 GH1P01241 217 aa14.15□□□□□ -0.14
LIN54-201ENST00000340417 CTTNQ14247 550 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms