RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ASPRV1Q53RT3 343 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 ZNF449Q6P9G9 518 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 C17orf53Q8N3J3 647 aaPredicted RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 ATP6V0A1Q93050 837 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 FAM193BQ96PV7 902 aaPredicted RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 MMS19Q96T76 1030 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
HLCS-201ENST00000336648 PLXNC1O60486 1568 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 A1BGP04217 495 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 ECE1P42892 770 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
HLCS-201ENST00000336648 PBKQ96KB5 322 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 NUB1Q9Y5A7 615 aa14.22□□□□□ -0.13
HLCS-201ENST00000336648 ADCY9O60503 1353 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 ABCC12Q96J65 1359 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 H7C0C1 242 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 ARHGEF9O43307 516 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 PCCAP05165 728 aaPredicted RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 ATP5OP48047 213 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 METTL13Q8N6R0 699 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 PCDHA7Q9UN72 937 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 PHLPP2Q6ZVD8 1323 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 TYW5A2RUC4 315 aaKnown RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 BUB1O43683 1085 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 YWHAGP61981 247 aaKnown RBP eCLIP14.21□□□□□ -0.13
HLCS-201ENST00000336648 PDE1BQ01064 536 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 EFCAB13Q8IY85 973 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 CCDC138Q96M89 665 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 ZFXP17010 805 aaPredicted RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 PSMC2P35998 433 aaKnown RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 PIK3CAP42336 1068 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 POLE2P56282 527 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 SLMAPQ14BN4 828 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 TMTC3Q6ZXV5 915 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 CREB3O43889 395 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 KCNA6P17658 529 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 ITKQ08881 620 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 FNBP4Q8N3X1 1017 aaPredicted RBP14.21□□□□□ -0.13
HLCS-201ENST00000336648 NME8Q8N427 588 aa14.21□□□□□ -0.13
HLCS-201ENST00000336648 WDR17Q8IZU2 1322 aa14.21□□□□□ -0.14
HLCS-201ENST00000336648 POLGP54098 1239 aaPredicted RBP14.21□□□□□ -0.14
HLCS-201ENST00000336648 IL1RL1Q01638 556 aa14.21□□□□□ -0.14
HLCS-201ENST00000336648 PPARDQ03181 441 aa14.21□□□□□ -0.14
HLCS-201ENST00000336648 TRIM60Q495X7 471 aa14.21□□□□□ -0.14
HLCS-201ENST00000336648 CERKLQ49MI3 558 aaPredicted RBP14.21□□□□□ -0.14
HLCS-201ENST00000336648 NRBF2Q96F24 287 aa14.21□□□□□ -0.14
HLCS-201ENST00000336648 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.14
HLCS-201ENST00000336648 BLMP54132 1417 aaPredicted RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 TCP10Q12799 353 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 TMC4Q7Z404 712 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 ZBTB38Q8NAP3 1195 aaPredicted RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 CNOT6LQ96LI5 555 aaKnown RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 WDR11Q9BZH6 1224 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 ZNF215Q9UL58 517 aaPredicted RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 ATP10DQ9P241 1426 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 E9PMD0 336 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 CIAO1O76071 339 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 CENPKQ9BS16 269 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 DESI2Q9BSY9 194 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 TMEM206Q9H813 350 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 DAAM1Q9Y4D1 1078 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 GUCY2DQ02846 1103 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 SLC39A14Q15043 492 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 CDC37Q16543 378 aaPredicted RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 FBXO18Q8NFZ0 1043 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 TUBGCP2Q9BSJ2 902 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 PPIP5K2O43314 1243 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 ICA1Q05084 483 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 NUDCD3Q8IVD9 361 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.2□□□□□ -0.14
HLCS-201ENST00000336648 AMNQ9BXJ7 453 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 TXLNGQ9NUQ3 528 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 POLR3EQ9NVU0 708 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 MAD1L1Q9Y6D9 718 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 ALAS1P13196 640 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 KIF22Q14807 665 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 CALR3Q96L12 384 aaKnown RBP14.2□□□□□ -0.14
HLCS-201ENST00000336648 YY1AP1Q9H869 796 aa14.2□□□□□ -0.14
HLCS-201ENST00000336648 PGRMC1O00264 195 aaKnown RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 MED7O43513 233 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 AFPP02771 609 aaKnown RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 ATP1A2P50993 1020 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 MAN2A1Q16706 1144 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 GRAMD4Q6IC98 578 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 SYMPKQ92797 1274 aaKnown RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 MAGOHBQ96A72 148 aaKnown RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 ANKRD36BP1Q96IX9 119 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 ACCSQ96QU6 501 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 ACTR5Q9H9F9 607 aaPredicted RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 LCMT1Q9UIC8 334 aa14.19□□□□□ -0.14
HLCS-201ENST00000336648 EIF3BP55884 814 aaKnown RBP14.19□□□□□ -0.14
HLCS-201ENST00000336648 CACTINQ8WUQ7 758 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms