RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 TRMT10CQ7L0Y3 403 aaKnown RBP11.51□□□□□ -0.57
CLN8-201ENST00000331222 RASSF4Q9H2L5 321 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 RIPOR2Q9Y4F9 1068 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 CLIC4Q9Y696 253 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 CHRNDQ07001 517 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 PSMD2Q13200 908 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 GBP5Q96PP8 586 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 LZTS2Q9BRK4 669 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 CALN1Q9BXU9 219 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 ENC1O14682 589 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 PTPREP23469 700 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 KCTD2Q14681 263 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 SLFN12Q8IYM2 578 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 ZBTB40Q9NUA8 1239 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 INHBAP08476 426 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 ELF1P32519 619 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 KRT27Q7Z3Y8 459 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 MLKLQ8NB16 471 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 SNX21Q969T3 373 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 KMT5AQ9NQR1 393 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
CLN8-201ENST00000331222 CFAP43Q8NDM7 1665 aa11.51□□□□□ -0.57
CLN8-201ENST00000331222 GARSP41250 739 aaKnown RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 NT5C3AQ9H0P0 336 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 ARPP21Q9UBL0 812 aaPredicted RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 TRPA1O75762 1119 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 BLVRAP53004 296 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 NFX1Q12986 1120 aaKnown RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 PPP2R5EQ16537 467 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 P3H4Q92791 437 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 HOXA13P31271 388 aaPredicted RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 ZKSCAN8Q15776 578 aaPredicted RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 CYP4F22Q6NT55 531 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 ZWILCHQ9H900 591 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 SAR1BQ9Y6B6 198 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 GOLGA8IPA6NC78 632 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 GOLGA8JA6NMD2 632 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 TOM1L1O75674 476 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 CCDC38Q502W7 563 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 OGFRQ9NZT2 677 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 ARMCX3Q9UH62 379 aaPredicted RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 SFI1A8K8P3 1242 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 RPN1P04843 607 aaKnown RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 EHHADHQ08426 723 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 KCNA1Q09470 495 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 PTGDRQ13258 359 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 RAB44Q7Z6P3 723 aaPredicted RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 MCF2L2Q86YR7 1114 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 COA7Q96BR5 231 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 RAD50Q92878 1312 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 M0R2C6 588 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 MIS18BP1Q6P0N0 1132 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 HEXIM2Q96MH2 286 aaKnown RBP11.5□□□□□ -0.57
CLN8-201ENST00000331222 GREM2Q9H772 168 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 NRBP2Q9NSY0 501 aa11.5□□□□□ -0.57
CLN8-201ENST00000331222 UGGT2Q9NYU1 1516 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 GNA14O95837 355 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 MYBP10242 640 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 PMLP29590 882 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 TMTC1Q8IUR5 882 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 SARS2Q9NP81 518 aaKnown RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 ATP8A2Q9NTI2 1148 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 NCF2P19878 526 aaPredicted RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 ADALQ6DHV7 355 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 DARS2Q6PI48 645 aaKnown RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 TEX2Q8IWB9 1127 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 DEPDC1BQ8WUY9 529 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 YIPF2Q9BWQ6 316 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 ZBTB7BO15156 539 aaPredicted RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 VCPP55072 806 aaKnown RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 GNGT1P63211 74 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 TMED2Q15363 201 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 UBE2SQ16763 222 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 PDZD4Q76G19 769 aaPredicted RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 PIP4K2CQ8TBX8 421 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 TBC1D22AQ8WUA7 517 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 ERO1AQ96HE7 468 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 CAPN7Q9Y6W3 813 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 BASP1P80723 227 aaKnown RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 THOC5Q13769 683 aaKnown RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 ZNF449Q6P9G9 518 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 NR1H4Q96RI1 486 aaPredicted RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
CLN8-201ENST00000331222 RNF40O75150 1001 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 CPP00450 1065 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 PFKFB1P16118 471 aa11.49□□□□□ -0.57
CLN8-201ENST00000331222 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms