RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 TSPY8P0CW00 308 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 SLC1A4P43007 532 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 SEC24CP53992 1094 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 SF3A3Q12874 501 aaKnown RBP eCLIP11.21□□□□□ -0.623e-7■□□□□ 9.5
SCMH1-201ENST00000326197 VWA3BQ502W6 1294 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 CCDC121Q6ZUS5 278 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 CEP57Q86XR8 500 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.62
SCMH1-201ENST00000326197 CARD10Q9BWT7 1032 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 TRIM9Q9C026 710 aa11.21□□□□□ -0.62
SCMH1-201ENST00000326197 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 A6NNZ2 444 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 TRAF5O00463 557 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 TUBB8Q3ZCM7 444 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 RNPC3Q96LT9 517 aaKnown RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 TFCP2L1Q9NZI6 479 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 KLRC4O43908 158 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 GNAQP50148 359 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 UIMC1Q96RL1 719 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 TJP1Q07157 1748 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 EPHB6O15197 1021 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 MYL1P05976 194 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 LSP1P33241 339 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 TNNC1P63316 161 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 MAN2A1Q16706 1144 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 RIOK1Q9BRS2 568 aaKnown RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 YY1AP1Q9H869 796 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 TBC1D7Q9P0N9 293 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
SCMH1-201ENST00000326197 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
SCMH1-201ENST00000326197 PALMO75781 387 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 NONOQ15233 471 aaKnown RBP eCLIP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 FAM153CQ494X1 144 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 SUGP1Q8IWZ8 645 aaKnown RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 CCDC155Q8N6L0 562 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 UBLCP1Q8WVY7 318 aaPredicted RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 KBTBD4Q9NVX7 518 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 FAM153AQ9UHL3 310 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 ADAMTS7Q9UKP4 1686 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 ECM29Q5VYK3 1845 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 FAM170AA1A519 330 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 MEFVO15553 781 aaPredicted RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 CPP00450 1065 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 GLI1P08151 1106 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 PPP1R2P41236 205 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 POLR2FP61218 127 aaKnown RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 KIAA0753Q2KHM9 967 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 SFMBT2Q5VUG0 894 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 MTMR8Q96EF0 704 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 DYNLL2Q96FJ2 89 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 ERGIC2Q96RQ1 377 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 KCNK3O14649 394 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 CEP104O60308 925 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 KRT18P05783 430 aaKnown RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 SF3B2Q13435 895 aaKnown RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 ARFGAP2Q8N6H7 521 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 PROCA1Q8NCQ7 364 aaPredicted RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 SCLT1Q96NL6 688 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 GEMIN8Q9NWZ8 242 aaKnown RBP11.19□□□□□ -0.62
SCMH1-201ENST00000326197 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 PLAAQ9Y263 795 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
SCMH1-201ENST00000326197 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
SCMH1-201ENST00000326197 BACH1O14867 736 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 NKRFO15226 690 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCMH1-201ENST00000326197 MYZAPP0CAP1 466 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 PCP11498 1178 aaKnown RBP11.18□□□□□ -0.62
SCMH1-201ENST00000326197 ATP6V1AP38606 617 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 IFFO1Q0D2I5 559 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 NAA35Q5VZE5 725 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 NELFCDQ8IXH7 590 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 CEP89Q96ST8 783 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 TTYH3Q9C0H2 523 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 C6orf50Q9HD87 102 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 BIN2Q9UBW5 565 aaPredicted RBP11.18□□□□□ -0.62
SCMH1-201ENST00000326197 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 PPP1R37O75864 691 aa11.18□□□□□ -0.62
SCMH1-201ENST00000326197 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
SCMH1-201ENST00000326197 MECOMQ03112 1051 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms