RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.02
ZNF541-202ENST00000314121 CCDC160A6NGH7 325 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 TRPC3Q13507 836 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 SEPT2Q15019 361 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 ANKRD20A3Q5VUR7 823 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CCDC62Q6P9F0 684 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 TMEM94Q12767 1356 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 TEX33O43247 280 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CTIFO43310 598 aaKnown RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CYP4A11Q02928 519 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 P3H4Q92791 437 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 LEMD3Q9Y2U8 911 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 MRFAP1Q9Y605 127 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 NRKQ7Z2Y5 1582 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 KIF28PB7ZC32 967 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 FTCDO95954 541 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 AFPP02771 609 aaKnown RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 SERPING1P05155 500 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 MYCLP12524 364 aaPredicted RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CCDC14Q49A88 953 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CPXCR1Q8N123 301 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 GRK7Q8WTQ7 553 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 MAGOHBQ96A72 148 aaKnown RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 PBKQ96KB5 322 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 INTS9Q9NV88 658 aaKnown RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CFAP157Q5JU67 520 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 C10orf76Q5T2E6 689 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 UHMK1Q8TAS1 419 aaKnown RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 CCDC17Q96LX7 622 aa15.2■□□□□ 0.02
ZNF541-202ENST00000314121 TYW1Q9NV66 732 aaKnown RBP15.2■□□□□ 0.02
ZNF541-202ENST00000314121 PABPC4Q13310 644 aaKnown RBP eCLIP15.19■□□□□ 0.02
ZNF541-202ENST00000314121 LGSNQ5TDP6 509 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 ARMC9Q7Z3E5 817 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 VPS52Q8N1B4 723 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 RABGAP1Q9Y3P9 1069 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 OXER1Q8TDS5 423 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 PPP1R12CQ9BZL4 782 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 VPS37BQ9H9H4 285 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 PASKQ96RG2 1323 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 ADCY8P40145 1251 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 MIER3Q7Z3K6 550 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 EPC1Q9H2F5 836 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 SH3GLB2Q9NR46 395 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 COMMD10Q9Y6G5 202 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 LRRIQ1Q96JM4 1722 aa15.19■□□□□ 0.02
ZNF541-202ENST00000314121 HIP1RO75146 1068 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
ZNF541-202ENST00000314121 PPM1KQ8N3J5 372 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 CCDC197Q8NCU1 140 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 DPF2Q92785 391 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 WDR24Q96S15 920 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 PIGSQ96S52 555 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 AMNQ9BXJ7 453 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 VPS41P49754 854 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 CCDC38Q502W7 563 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 GLE1Q53GS7 698 aaKnown RBP15.18■□□□□ 0.02
ZNF541-202ENST00000314121 FAM133AQ8N9E0 248 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 PIGBQ92521 554 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 VTI1AQ96AJ9 217 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 ADAMTS1Q9UHI8 967 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 FAM170AA1A519 330 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 USP17L8P0C7I0 530 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 TNNI1P19237 187 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 NR1D1P20393 614 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 PRCPP42785 496 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 NSMFQ6X4W1 530 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 EMILIN3Q9NT22 766 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 RIPOR2Q9Y4F9 1068 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 PXDNLA1KZ92 1463 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 THAP12O43422 761 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 IFNB1P01574 187 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 CLTAP09496 248 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 SLC7A5Q01650 507 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
ZNF541-202ENST00000314121 CERKLQ49MI3 558 aaPredicted RBP15.18■□□□□ 0.02
ZNF541-202ENST00000314121 ODR4Q5SWX8 454 aa15.18■□□□□ 0.02
ZNF541-202ENST00000314121 FOXN1O15353 648 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 TROVE2P10155 538 aaKnown RBP eCLIP15.17■□□□□ 0.02
ZNF541-202ENST00000314121 FOXO4P98177 505 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 RNF10Q8N5U6 811 aaKnown RBP15.17■□□□□ 0.02
ZNF541-202ENST00000314121 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 MYCBPQ99417 103 aaPredicted RBP15.17■□□□□ 0.02
ZNF541-202ENST00000314121 ZNF609O15014 1411 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 CD19P15391 556 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 DHX9Q08211 1270 aaKnown RBP15.17■□□□□ 0.02
ZNF541-202ENST00000314121 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
ZNF541-202ENST00000314121 PFKFB3Q16875 520 aaPredicted RBP15.17■□□□□ 0.02
ZNF541-202ENST00000314121 USP17L2Q6R6M4 530 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 TUBE1Q9UJT0 475 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 ATP8A1Q9Y2Q0 1164 aa15.17■□□□□ 0.02
ZNF541-202ENST00000314121 SUN1O94901 812 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms