RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 S100BP04271 92 aaPredicted RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ACTN1P12814 892 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 PMS1P54277 932 aaKnown RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 IWS1Q96ST2 819 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 BAG5Q9UL15 447 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 LRRIQ4A6NIV6 560 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 A6NJR5 290 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 CFLARO15519 480 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 SUN1O94901 812 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 PLS3P13797 630 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 NCF2P19878 526 aaPredicted RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 DMP1Q13316 513 aaPredicted RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 LRRC24Q50LG9 513 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 HEXIM1O94992 359 aaKnown RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 PDCD2Q16342 344 aaPredicted RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 TRMT10CQ7L0Y3 403 aaKnown RBP17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ABCC2Q92887 1545 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 PDE1BQ01064 536 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ANKRD20A4Q4UJ75 823 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ANKRD20A8PQ5CZ79 823 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 GADL1Q6ZQY3 521 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 YY1AP1Q9H869 796 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 KRT82Q9NSB4 513 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 KIAA1024Q9UPX6 916 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 JRKLQ9Y4A0 524 aa17.54■□□□□ 0.4
SSRP1-202ENST00000293880 FAM178BQ8IXR5 827 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 SPTLC3Q9NUV7 552 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 PFKFB2O60825 505 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 ZRANB2O95218 330 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 SPATA1Q5VX52 437 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 MAGOHBQ96A72 148 aaKnown RBP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 ARPP21Q9UBL0 812 aaPredicted RBP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 SEPT9Q9UHD8 586 aaPredicted RBP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 APBA3O96018 575 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 CTSWP56202 376 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 CDR2Q01850 454 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 HABP4Q5JVS0 413 aaKnown RBP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 EXOC3L4Q17RC7 722 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 MAML1Q92585 1016 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 SCHIP1Q9P0W5 487 aaPredicted RBP17.53■□□□□ 0.4
SSRP1-202ENST00000293880 TNKSO95271 1327 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
SSRP1-202ENST00000293880 NEURL1BA8MQ27 555 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 GTPBP6O43824 516 aaPredicted RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 EEF1B2P24534 225 aaKnown RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 BRDTQ58F21 947 aaPredicted RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 HIPK4Q8NE63 616 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 SLAIN2Q9P270 581 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 NVLO15381 856 aaKnown RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 EEF1DP29692 281 aaKnown RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 POLGP54098 1239 aaPredicted RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 NNTQ13423 1086 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 ADCK5Q3MIX3 580 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 NEK8Q86SG6 692 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 CDC26Q8NHZ8 85 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 HAUS8Q9BT25 410 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 HAUS2Q9NVX0 235 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 POLR2MP0CAP2 368 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 TCP11X2Q5H9J9 407 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 RNF217Q8TC41 542 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 EXT2Q93063 718 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 TSC22D3Q99576 134 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 ANGPTL3Q9Y5C1 460 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 KRT1P04264 644 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 NSFP46459 744 aaKnown RBP17.52■□□□□ 0.4
SSRP1-202ENST00000293880 ARHGAP4P98171 946 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 GLT8D2Q9H1C3 349 aa17.52■□□□□ 0.4
SSRP1-202ENST00000293880 PRPSAP1Q14558 356 aa17.52■□□□□ 0.39
SSRP1-202ENST00000293880 PPP4R4Q6NUP7 873 aa17.52■□□□□ 0.39
SSRP1-202ENST00000293880 RINLQ6ZS11 566 aa17.52■□□□□ 0.39
SSRP1-202ENST00000293880 PI4K2BQ8TCG2 481 aa17.52■□□□□ 0.39
SSRP1-202ENST00000293880 TEKT3Q9BXF9 490 aa17.52■□□□□ 0.39
SSRP1-202ENST00000293880 MED4Q9NPJ6 270 aa17.52■□□□□ 0.39
SSRP1-202ENST00000293880 GOLGA8SH3BPF8 625 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 RSBN1LQ6PCB5 846 aaPredicted RBP17.51■□□□□ 0.39
SSRP1-202ENST00000293880 RYBPQ8N488 228 aaPredicted RBP17.51■□□□□ 0.39
SSRP1-202ENST00000293880 TESK2Q96S53 571 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 GFPT2O94808 682 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 CMA1P23946 247 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 CNGA1P29973 690 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 KCTD1Q719H9 257 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 NCAPG2Q86XI2 1143 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 TUBGCP2Q9BSJ2 902 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 MAN1B1Q9UKM7 699 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 MED23Q9ULK4 1368 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 DEPDC1BQ8WUY9 529 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 CCDC68Q9H2F9 335 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 ANAPC5Q9UJX4 755 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 TBX22Q9Y458 520 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 SCINQ9Y6U3 715 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 MAST3O60307 1309 aa17.51■□□□□ 0.39
SSRP1-202ENST00000293880 SPDYE2BA6NHP3 402 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms