RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 AFF2P51816 1311 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 POTEB3A0JP26 581 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 POTEFA5A3E0 1075 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 POTECB2RU33 542 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 CAMTA2O94983 1202 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 POTEIP0CG38 1075 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 CA8P35219 290 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 POTEBQ6S5H4 581 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 POTEGQ6S5H5 508 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 POTEEQ6S8J3 1075 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 HOOK3Q86VS8 718 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ZNF354CQ86Y25 554 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 FAM178BQ8IXR5 827 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 BANK1Q8NDB2 785 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 NSUN4Q96CB9 384 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 PPANQ9NQ55 473 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 LEMD3Q9Y2U8 911 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GOLGA6CA6NDK9 693 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 NCK2O43639 380 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GFPT2O94808 682 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GOLGA6DP0CG33 693 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 CLCN6P51797 869 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 OSTNP61366 133 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GABPB1Q06547 395 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 CDC37Q16543 378 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 KRT12Q99456 494 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GOLGA6AQ9NYA3 693 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 SALL3Q9BXA9 1300 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 USP42Q9H9J4 1324 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 GOLGA6BA6NDN3 693 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 H7C1D1 291 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 AKR1B1P15121 316 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 MARK3P27448 753 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 PPP2R5DQ14738 602 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ODR4Q5SWX8 454 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GADL1Q6ZQY3 521 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 SEPT14Q6ZU15 432 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 AFAP1L1Q8TED9 768 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 P2RX5Q93086 422 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 WDR24Q96S15 920 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 AP1M1Q9BXS5 423 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 NHEJ1Q9H9Q4 299 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 DNAJC17Q9NVM6 304 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 ZBTB22O15209 634 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ZBTB7AO95365 584 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 PTPREP23469 700 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 EIF4A3P38919 411 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 DNM2P50570 870 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 SNX1Q13596 522 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 SPATA31D1Q6ZQQ2 1576 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 LZTS2Q9BRK4 669 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 TAOK3Q9H2K8 898 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ZBTB12Q9Y330 459 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 EIF2AK2P19525 551 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 POLD1P28340 1107 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 CDC25BP30305 580 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GUCY2DQ02846 1103 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 PPP2R5BQ15173 497 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 FAM83BQ5T0W9 1011 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 INTS5Q6P9B9 1019 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 CHP1Q99653 195 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ZNF577Q9BSK1 485 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 MLXIPQ9HAP2 919 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 SMARCAL1Q9NZC9 954 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ARMCX3Q9UH62 379 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 NARFQ9UHQ1 456 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 RABGAP1Q9Y3P9 1069 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GCOM1H8Y6P7 765 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 NOP56O00567 594 aaKnown RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 ZNF185O15231 689 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 MYZAPP0CAP1 466 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 GFPT1Q06210 699 aaPredicted RBP5.27□□□□□ -1.57
UBR1-201ENST00000290650 TRIM14Q14142 442 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 RPS6KA1Q15418 735 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 NBPF11Q86T75 865 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 ADGRF4Q8IZF3 695 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 PARD6BQ9BYG5 372 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 PEAK1Q9H792 1746 aa5.27□□□□□ -1.57
UBR1-201ENST00000290650 RPS6KA4O75676 772 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 VIMP08670 466 aaKnown RBP5.26□□□□□ -1.57
UBR1-201ENST00000290650 POLR2MP0CAP2 368 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 CRKP46108 304 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 MNAT1P51948 309 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 PFKFB3Q16875 520 aaPredicted RBP5.26□□□□□ -1.57
UBR1-201ENST00000290650 SLC30A10Q6XR72 485 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 ARHGAP27Q6ZUM4 889 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 KRT26Q7Z3Y9 468 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 DDX12PQ92771 950 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 GSDMAQ96QA5 445 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 ERCC5P28715 1186 aaPredicted RBP5.26□□□□□ -1.57
UBR1-201ENST00000290650 IQCB1Q15051 598 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 CPLX4Q7Z7G2 160 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 PLCD3Q8N3E9 789 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 ZNF526Q8TF50 670 aaPredicted RBP5.26□□□□□ -1.57
UBR1-201ENST00000290650 BHMT2Q9H2M3 363 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 TMOD4Q9NZQ9 345 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 FBXO2Q9UK22 296 aaPredicted RBP5.26□□□□□ -1.57
UBR1-201ENST00000290650 AGTPBP1Q9UPW5 1226 aa5.26□□□□□ -1.57
UBR1-201ENST00000290650 PLA2G4BP0C869 781 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms