RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 HNRNPCL2B2RXH8 293 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 HNRNPCL1O60812 293 aaKnown RBP15.54■□□□□ 0.08
CUX2-201ENST00000261726 KIAA1468Q9P260 1216 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 CCDC138Q96M89 665 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 SLC52A2Q9HAB3 445 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 EPS15L1Q9UBC2 864 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 ZKSCAN8Q15776 578 aaPredicted RBP15.54■□□□□ 0.08
CUX2-201ENST00000261726 TMTC3Q6ZXV5 915 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 BBOF1Q8ND07 529 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 ALKBH8Q96BT7 664 aaKnown RBP15.54■□□□□ 0.08
CUX2-201ENST00000261726 BCL2L12Q9HB09 334 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 CCPG1Q9ULG6 757 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 HEXIM1O94992 359 aaKnown RBP15.54■□□□□ 0.08
CUX2-201ENST00000261726 CPP00450 1065 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 PDE6AP16499 860 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 FAM160B1Q5W0V3 765 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 G3BP2Q9UN86 482 aaKnown RBP15.54■□□□□ 0.08
CUX2-201ENST00000261726 AOX1Q06278 1338 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 PTPREP23469 700 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 ATP6V1E1P36543 226 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 IL9RQ01113 521 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 LLGL1Q15334 1064 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 TMED2Q15363 201 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 PPP2R5EQ16537 467 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 ADALQ6DHV7 355 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 KIAA0825Q8IV33 1275 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 DNAAF3Q8N9W5 541 aa15.54■□□□□ 0.08
CUX2-201ENST00000261726 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 HMGB1P1B2RPK0 211 aaPredicted RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 PFDN1O60925 122 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 MAP7D3Q8IWC1 876 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 BBS5Q8N3I7 341 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 FAM149B1Q96BN6 582 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 SLC38A10Q9HBR0 1119 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 NRBP2Q9NSY0 501 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 RTEL1Q9NZ71 1219 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 DNAJC8O75937 253 aaPredicted RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 GYG1P46976 350 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 MCF2L2Q86YR7 1114 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 SEPT8Q92599 483 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 SUFUQ9UMX1 484 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 POLR3AO14802 1390 aaPredicted RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 H2AFZP0C0S5 128 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 PTK2Q05397 1052 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 TNFAIP1Q13829 316 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 H2AFVQ71UI9 128 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 DSCC1Q9BVC3 393 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 H0YCG3 227 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 EXOC3L4Q17RC7 722 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 RASEFQ8IZ41 740 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 SUCLA2Q9P2R7 463 aaPredicted RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 KLRF2D3W0D1 207 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 EEF1B2P24534 225 aaKnown RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 NOP14P78316 857 aaKnown RBP15.53■□□□□ 0.08
CUX2-201ENST00000261726 RMDN2Q96LZ7 410 aa15.53■□□□□ 0.08
CUX2-201ENST00000261726 EVI5O60447 810 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 SLC8A1P32418 973 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 PNMA1Q8ND90 353 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 ANKRD36BP1Q96IX9 119 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 TMEM232C9JQI7 657 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 MFAP3P55082 362 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 ZNF449Q6P9G9 518 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 INTS9Q9NV88 658 aaKnown RBP15.52■□□□□ 0.08
CUX2-201ENST00000261726 FANCLQ9NW38 375 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 CFAP36Q96G28 342 aa15.52■□□□□ 0.08
CUX2-201ENST00000261726 SCHIP1Q9P0W5 487 aaPredicted RBP15.52■□□□□ 0.08
CUX2-201ENST00000261726 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 CCT5P48643 541 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 ICA1Q05084 483 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 SYMPKQ92797 1274 aaKnown RBP15.52■□□□□ 0.07
CUX2-201ENST00000261726 MAGOHBQ96A72 148 aaKnown RBP15.52■□□□□ 0.07
CUX2-201ENST00000261726 DCPSQ96C86 337 aaKnown RBP15.52■□□□□ 0.07
CUX2-201ENST00000261726 SNX25Q9H3E2 840 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 METTL14Q9HCE5 456 aaKnown RBP15.52■□□□□ 0.07
CUX2-201ENST00000261726 LMBRD1Q9NUN5 540 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 LRFN2Q9ULH4 789 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 ENC1O14682 589 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 HNRNPDLO14979 420 aaKnown RBP15.52■□□□□ 0.07
CUX2-201ENST00000261726 SUN1O94901 812 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 CTSWP56202 376 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 THOC5Q13769 683 aaKnown RBP15.52■□□□□ 0.07
CUX2-201ENST00000261726 ARHGAP27Q6ZUM4 889 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 GDAP1Q8TB36 358 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 SFMBT1Q9UHJ3 866 aa15.52■□□□□ 0.07
CUX2-201ENST00000261726 TOM1L1O75674 476 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 ZNF445P59923 1031 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 ODR4Q5SWX8 454 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 IFNL3Q8IZI9 196 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 INPP5FQ9Y2H2 1132 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 ZFYVE9O95405 1425 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 LRRD1A4D1F6 860 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 CYP4F22Q6NT55 531 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 TRMT10CQ7L0Y3 403 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 PPP1R16BQ96T49 567 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 PDE11AQ9HCR9 933 aa15.51■□□□□ 0.07
CUX2-201ENST00000261726 CPSF3Q9UKF6 684 aaKnown RBP15.51■□□□□ 0.07
CUX2-201ENST00000261726 GOLGA8QA0A0J9YX86 632 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms