RNA–Protein interactions for RNA: ENST00000634781.1

SMARCA2-229, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-229ENST00000634781 VARS2Q5ST30 1063 aaKnown RBP10.59□□□□□ -0.71
SMARCA2-229ENST00000634781 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-229ENST00000634781 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-229ENST00000634781 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
SMARCA2-229ENST00000634781 MYT1LQ9UL68 1186 aa10.57□□□□□ -0.72
SMARCA2-229ENST00000634781 STK25O00506 426 aa10.55□□□□□ -0.72
SMARCA2-229ENST00000634781 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
SMARCA2-229ENST00000634781 ZNF687Q8N1G0 1237 aa10.53□□□□□ -0.72
SMARCA2-229ENST00000634781 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
SMARCA2-229ENST00000634781 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
SMARCA2-229ENST00000634781 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
SMARCA2-229ENST00000634781 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
SMARCA2-229ENST00000634781 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
SMARCA2-229ENST00000634781 TMEM92Q6UXU6 159 aa10.49□□□□□ -0.73
SMARCA2-229ENST00000634781 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
SMARCA2-229ENST00000634781 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
SMARCA2-229ENST00000634781 MICALL2Q8IY33 904 aa10.48□□□□□ -0.73
SMARCA2-229ENST00000634781 PTGER2P43116 358 aa10.47□□□□□ -0.73
SMARCA2-229ENST00000634781 GPR153Q6NV75 609 aa10.47□□□□□ -0.73
SMARCA2-229ENST00000634781 SPRYD3Q8NCJ5 442 aa10.45□□□□□ -0.74
SMARCA2-229ENST00000634781 SLC24A1O60721 1099 aa10.44□□□□□ -0.74
SMARCA2-229ENST00000634781 PAXIP1Q6ZW49 1069 aaPredicted RBP10.43□□□□□ -0.74
SMARCA2-229ENST00000634781 RYDENQ9NUL5 291 aaKnown RBP10.42□□□□□ -0.74
SMARCA2-229ENST00000634781 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
SMARCA2-229ENST00000634781 ANKRD13DQ6ZTN6 518 aa10.4□□□□□ -0.74
SMARCA2-229ENST00000634781 SOX12O15370 315 aa10.39□□□□□ -0.75
SMARCA2-229ENST00000634781 ARSIQ5FYB1 569 aa10.39□□□□□ -0.75
SMARCA2-229ENST00000634781 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
SMARCA2-229ENST00000634781 NKX1-1Q15270 411 aaPredicted RBP10.36□□□□□ -0.75
SMARCA2-229ENST00000634781 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-229ENST00000634781 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-229ENST00000634781 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCA2-229ENST00000634781 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMARCA2-229ENST00000634781 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
SMARCA2-229ENST00000634781 GTPBP6O43824 516 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-229ENST00000634781 NLRP6P59044 892 aa10.29□□□□□ -0.76
SMARCA2-229ENST00000634781 PBX2P40425 430 aa10.25□□□□□ -0.77
SMARCA2-229ENST00000634781 MFRPQ9BY79 579 aa10.25□□□□□ -0.77
SMARCA2-229ENST00000634781 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
SMARCA2-229ENST00000634781 NUDT7P0C024 238 aa10.22□□□□□ -0.77
SMARCA2-229ENST00000634781 VSIG10Q8N0Z9 540 aa10.21□□□□□ -0.77
SMARCA2-229ENST00000634781 FBXO22Q8NEZ5 403 aa10.2□□□□□ -0.78
SMARCA2-229ENST00000634781 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
SMARCA2-229ENST00000634781 HCSTQ9UBK5 93 aa10.2□□□□□ -0.78
SMARCA2-229ENST00000634781 POTEEQ6S8J3 1075 aa10.19□□□□□ -0.78
SMARCA2-229ENST00000634781 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
SMARCA2-229ENST00000634781 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
SMARCA2-229ENST00000634781 KIF3CO14782 793 aa10.17□□□□□ -0.78
SMARCA2-229ENST00000634781 C2orf72A6NCS6 295 aa10.16□□□□□ -0.78
SMARCA2-229ENST00000634781 PCDHGA4Q9Y5G9 962 aa10.15□□□□□ -0.78
SMARCA2-229ENST00000634781 SLC34A2O95436 690 aa10.12□□□□□ -0.79
SMARCA2-229ENST00000634781 ADGRD1Q6QNK2 874 aa10.12□□□□□ -0.79
SMARCA2-229ENST00000634781 PPP1R37O75864 691 aa10.11□□□□□ -0.79
SMARCA2-229ENST00000634781 ARHGAP33O14559 1287 aa10.1□□□□□ -0.79
SMARCA2-229ENST00000634781 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
SMARCA2-229ENST00000634781 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
SMARCA2-229ENST00000634781 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
SMARCA2-229ENST00000634781 TK2O00142 265 aa10.04□□□□□ -0.8
SMARCA2-229ENST00000634781 HRO43593 1189 aa10.02□□□□□ -0.81
SMARCA2-229ENST00000634781 WDR70Q9NW82 654 aa10.02□□□□□ -0.81
SMARCA2-229ENST00000634781 DMRTA1Q5VZB9 504 aa10.01□□□□□ -0.81
SMARCA2-229ENST00000634781 PDE4AP27815 886 aa10□□□□□ -0.81
SMARCA2-229ENST00000634781 CADPS2Q86UW7 1296 aa10□□□□□ -0.81
SMARCA2-229ENST00000634781 KCTD12Q96CX2 325 aaKnown RBP10□□□□□ -0.81
SMARCA2-229ENST00000634781 PSEN2P49810 448 aa9.99□□□□□ -0.81
SMARCA2-229ENST00000634781 STAC3Q96MF2 364 aa9.98□□□□□ -0.81
SMARCA2-229ENST00000634781 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
SMARCA2-229ENST00000634781 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
SMARCA2-229ENST00000634781 PPP4R3BQ5MIZ7 849 aa9.94□□□□□ -0.82
SMARCA2-229ENST00000634781 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
SMARCA2-229ENST00000634781 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
SMARCA2-229ENST00000634781 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
SMARCA2-229ENST00000634781 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
SMARCA2-229ENST00000634781 RGS20O76081 388 aa9.9□□□□□ -0.82
SMARCA2-229ENST00000634781 PTPN5P54829 565 aa9.89□□□□□ -0.83
SMARCA2-229ENST00000634781 P3H3Q8IVL6 736 aa9.89□□□□□ -0.83
SMARCA2-229ENST00000634781 DDX27Q96GQ7 796 aaKnown RBP9.89□□□□□ -0.83
SMARCA2-229ENST00000634781 KCNH8Q96L42 1107 aa9.89□□□□□ -0.83
SMARCA2-229ENST00000634781 MFSD10Q14728 455 aa9.88□□□□□ -0.83
SMARCA2-229ENST00000634781 KCNK17Q96T54 332 aa9.88□□□□□ -0.83
SMARCA2-229ENST00000634781 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
SMARCA2-229ENST00000634781 BCANQ96GW7 911 aa9.87□□□□□ -0.83
SMARCA2-229ENST00000634781 TBC1D12O60347 775 aa9.86□□□□□ -0.83
SMARCA2-229ENST00000634781 FOXK1P85037 733 aa9.86□□□□□ -0.83
SMARCA2-229ENST00000634781 E2F4Q16254 413 aa9.86□□□□□ -0.83
SMARCA2-229ENST00000634781 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
SMARCA2-229ENST00000634781 IRX2Q9BZI1 471 aaPredicted RBP9.86□□□□□ -0.83
SMARCA2-229ENST00000634781 VPS9D1Q9Y2B5 631 aa9.85□□□□□ -0.83
SMARCA2-229ENST00000634781 PPP1R15BQ5SWA1 713 aa9.83□□□□□ -0.84
SMARCA2-229ENST00000634781 A0A0G2JS52 829 aa9.81□□□□□ -0.84
SMARCA2-229ENST00000634781 NBR1Q14596 966 aa9.81□□□□□ -0.84
SMARCA2-229ENST00000634781 DSG2Q14126 1118 aa9.8□□□□□ -0.84
SMARCA2-229ENST00000634781 THSD4Q6ZMP0 1018 aa9.79□□□□□ -0.84
SMARCA2-229ENST00000634781 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
SMARCA2-229ENST00000634781 SLC4A5Q9BY07 1137 aa9.79□□□□□ -0.84
SMARCA2-229ENST00000634781 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
SMARCA2-229ENST00000634781 CAMK2BQ13554 666 aa9.77□□□□□ -0.85
SMARCA2-229ENST00000634781 GOLGA8CPA6NN73 597 aa9.76□□□□□ -0.85
SMARCA2-229ENST00000634781 BHMG1C9JSJ3 638 aaPredicted RBP9.76□□□□□ -0.85
SMARCA2-229ENST00000634781 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms