RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 GTF2E1P29083 439 aaPredicted RBP6.98□□□□□ -1.29
CHD2-204ENST00000625463 ZBTB47Q9UFB7 747 aaPredicted RBP6.98□□□□□ -1.29
CHD2-204ENST00000625463 PPM1GO15355 546 aaPredicted RBP6.97□□□□□ -1.29
CHD2-204ENST00000625463 IGSF3O75054 1194 aa6.97□□□□□ -1.29
CHD2-204ENST00000625463 HSP90AA1P07900 732 aaKnown RBP6.97□□□□□ -1.29
CHD2-204ENST00000625463 MCCP23508 829 aa6.97□□□□□ -1.29
CHD2-204ENST00000625463 ANP32BQ92688 251 aaKnown RBP6.97□□□□□ -1.29
CHD2-204ENST00000625463 CREBZFQ9NS37 354 aa6.97□□□□□ -1.29
CHD2-204ENST00000625463 NPM1P06748 294 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD2-204ENST00000625463 PRR29P0C7W0 189 aa6.96□□□□□ -1.3
CHD2-204ENST00000625463 CNPY4Q8N129 248 aa6.96□□□□□ -1.3
CHD2-204ENST00000625463 STAC3Q96MF2 364 aa6.96□□□□□ -1.3
CHD2-204ENST00000625463 PLCD4Q9BRC7 762 aa6.96□□□□□ -1.3
CHD2-204ENST00000625463 WASHC2CQ9Y4E1 1318 aa6.96□□□□□ -1.3
CHD2-204ENST00000625463 ZNF316A6NFI3 1004 aaPredicted RBP6.95□□□□□ -1.3
CHD2-204ENST00000625463 PITPNM1O00562 1244 aa6.95□□□□□ -1.3
CHD2-204ENST00000625463 MNX1P50219 401 aaPredicted RBP6.95□□□□□ -1.3
CHD2-204ENST00000625463 NUBP1P53384 320 aa6.95□□□□□ -1.3
CHD2-204ENST00000625463 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
CHD2-204ENST00000625463 CLGNO14967 610 aa6.94□□□□□ -1.3
CHD2-204ENST00000625463 SETQ01105 290 aaPredicted RBP6.94□□□□□ -1.3
CHD2-204ENST00000625463 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
CHD2-204ENST00000625463 ZNF592Q92610 1267 aa6.94□□□□□ -1.3
CHD2-204ENST00000625463 PSMD1Q99460 953 aa6.94□□□□□ -1.3
CHD2-204ENST00000625463 PRDM4Q9UKN5 801 aa6.94□□□□□ -1.3
CHD2-204ENST00000625463 NOP58Q9Y2X3 529 aaKnown RBP6.94□□□□□ -1.3
CHD2-204ENST00000625463 WWC1Q8IX03 1113 aa6.92□□□□□ -1.3
CHD2-204ENST00000625463 WASHC2AQ641Q2 1341 aa6.92□□□□□ -1.3
CHD2-204ENST00000625463 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
CHD2-204ENST00000625463 ZNF622Q969S3 477 aaKnown RBP eCLIP6.9□□□□□ -1.33e-8■□□□□ 8.7
CHD2-204ENST00000625463 RNF25Q96BH1 459 aaPredicted RBP6.89□□□□□ -1.31
CHD2-204ENST00000625463 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
CHD2-204ENST00000625463 ANP32AP39687 249 aaKnown RBP6.88□□□□□ -1.31
CHD2-204ENST00000625463 FAM193AP78312 1265 aa6.88□□□□□ -1.31
CHD2-204ENST00000625463 GSE1Q14687 1217 aa6.88□□□□□ -1.31
CHD2-204ENST00000625463 DCAF8Q5TAQ9 597 aa6.88□□□□□ -1.31
CHD2-204ENST00000625463 RASEFQ8IZ41 740 aa6.88□□□□□ -1.31
CHD2-204ENST00000625463 PHF14O94880 888 aa6.87□□□□□ -1.31
CHD2-204ENST00000625463 NBR1Q14596 966 aa6.87□□□□□ -1.31
CHD2-204ENST00000625463 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
CHD2-204ENST00000625463 PRDM10Q9NQV6 1147 aa6.87□□□□□ -1.31
CHD2-204ENST00000625463 CHGAP10645 457 aaKnown RBP6.86□□□□□ -1.31
CHD2-204ENST00000625463 MMP14P50281 582 aa6.86□□□□□ -1.31
CHD2-204ENST00000625463 CHADLQ6NUI6 762 aa6.86□□□□□ -1.31
CHD2-204ENST00000625463 IRX3P78415 501 aaPredicted RBP6.85□□□□□ -1.31
CHD2-204ENST00000625463 TRIM44Q96DX7 344 aaPredicted RBP6.85□□□□□ -1.31
CHD2-204ENST00000625463 CFAP44Q96MT7 982 aa6.85□□□□□ -1.31
CHD2-204ENST00000625463 CC2D2BQ6DHV5 1058 aa6.84□□□□□ -1.31
CHD2-204ENST00000625463 RGS22Q8NE09 1264 aa6.84□□□□□ -1.31
CHD2-204ENST00000625463 RGS3P49796 1198 aa6.83□□□□□ -1.32
CHD2-204ENST00000625463 SMAP1Q8IYB5 467 aaPredicted RBP6.83□□□□□ -1.32
CHD2-204ENST00000625463 FAM212AQ96EL1 285 aa6.83□□□□□ -1.32
CHD2-204ENST00000625463 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
CHD2-204ENST00000625463 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
CHD2-204ENST00000625463 TAF3Q5VWG9 929 aa6.82□□□□□ -1.32
CHD2-204ENST00000625463 MAP7D2Q96T17 732 aa6.82□□□□□ -1.32
CHD2-204ENST00000625463 DNAJC2Q99543 621 aaKnown RBP6.82□□□□□ -1.32
CHD2-204ENST00000625463 TNNT2P45379 298 aaPredicted RBP6.81□□□□□ -1.32
CHD2-204ENST00000625463 UTP14CQ5TAP6 766 aaKnown RBP6.81□□□□□ -1.32
CHD2-204ENST00000625463 APPP05067 770 aa6.8□□□□□ -1.32
CHD2-204ENST00000625463 HS6ST3Q8IZP7 471 aa6.8□□□□□ -1.32
CHD2-204ENST00000625463 CEP120Q8N960 986 aa6.8□□□□□ -1.32
CHD2-204ENST00000625463 RIOK3O14730 519 aaKnown RBP6.79□□□□□ -1.32
CHD2-204ENST00000625463 MAFGO15525 162 aa6.79□□□□□ -1.32
CHD2-204ENST00000625463 TPM2P07951 284 aa6.79□□□□□ -1.32
CHD2-204ENST00000625463 PYGBP11216 843 aa6.79□□□□□ -1.32
CHD2-204ENST00000625463 TMED8Q6PL24 325 aaPredicted RBP6.79□□□□□ -1.32
CHD2-204ENST00000625463 ZNF830Q96NB3 372 aaPredicted RBP6.79□□□□□ -1.32
CHD2-204ENST00000625463 HDAC5Q9UQL6 1122 aa6.79□□□□□ -1.32
CHD2-204ENST00000625463 ANAPC15P60006 121 aa6.78□□□□□ -1.32
CHD2-204ENST00000625463 CERS3Q8IU89 383 aa6.78□□□□□ -1.32
CHD2-204ENST00000625463 TMEM51Q9NW97 253 aa6.78□□□□□ -1.32
CHD2-204ENST00000625463 LAS1LQ9Y4W2 734 aaKnown RBP6.78□□□□□ -1.32
CHD2-204ENST00000625463 PRKAR2AP13861 404 aaKnown RBP6.77□□□□□ -1.33
CHD2-204ENST00000625463 FAM43BQ6ZT52 329 aaPredicted RBP6.77□□□□□ -1.33
CHD2-204ENST00000625463 GPATCH11Q8N954 259 aa6.77□□□□□ -1.33
CHD2-204ENST00000625463 SPRYD3Q8NCJ5 442 aa6.77□□□□□ -1.33
CHD2-204ENST00000625463 KDM2AQ9Y2K7 1162 aa6.77□□□□□ -1.33
CHD2-204ENST00000625463 FARP1Q9Y4F1 1045 aaPredicted RBP6.77□□□□□ -1.33
CHD2-204ENST00000625463 TSPYL2Q9H2G4 693 aaPredicted RBP6.76□□□□□ -1.33
CHD2-204ENST00000625463 ZBTB7CA1YPR0 619 aa6.75□□□□□ -1.33
CHD2-204ENST00000625463 FXR2P51116 673 aaKnown RBP eCLIP6.75□□□□□ -1.331e-7■□□□□ 8.6
CHD2-204ENST00000625463 OS9Q13438 667 aaPredicted RBP6.75□□□□□ -1.33
CHD2-204ENST00000625463 NKX1-1Q15270 411 aaPredicted RBP6.75□□□□□ -1.33
CHD2-204ENST00000625463 PNNQ9H307 717 aaKnown RBP6.75□□□□□ -1.33
CHD2-204ENST00000625463 PRDM16Q9HAZ2 1276 aa6.75□□□□□ -1.33
CHD2-204ENST00000625463 NBPF20Q3BBV1 942 aa6.74□□□□□ -1.33
CHD2-204ENST00000625463 IPO9Q96P70 1041 aaKnown RBP6.74□□□□□ -1.33
CHD2-204ENST00000625463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.73□□□□□ -1.33
CHD2-204ENST00000625463 STK25O00506 426 aa6.73□□□□□ -1.33
CHD2-204ENST00000625463 KIF20AO95235 890 aa6.73□□□□□ -1.33
CHD2-204ENST00000625463 CC2D1BQ5T0F9 858 aaKnown RBP6.73□□□□□ -1.33
CHD2-204ENST00000625463 MTERF4Q7Z6M4 381 aaKnown RBP6.73□□□□□ -1.33
CHD2-204ENST00000625463 DNAJC5Q9H3Z4 198 aa6.73□□□□□ -1.33
CHD2-204ENST00000625463 CHRDL2Q6WN34 429 aa6.72□□□□□ -1.33
CHD2-204ENST00000625463 ZNF526Q8TF50 670 aaPredicted RBP6.72□□□□□ -1.33
CHD2-204ENST00000625463 GOLGA6L3A6NEY3 463 aa6.71□□□□□ -1.34
CHD2-204ENST00000625463 PSEN1P49768 467 aa6.71□□□□□ -1.34
CHD2-204ENST00000625463 PPP4R3BQ5MIZ7 849 aa6.71□□□□□ -1.34
CHD2-204ENST00000625463 PIP4P2Q8N4L2 257 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms