RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 CAMK2BQ13554 666 aa7.45□□□□□ -1.22
LRRC39-204ENST00000620882 HOMEZQ8IX15 550 aa7.44□□□□□ -1.22
LRRC39-204ENST00000620882 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
LRRC39-204ENST00000620882 PDE4AP27815 886 aa7.44□□□□□ -1.22
LRRC39-204ENST00000620882 ARIH1Q9Y4X5 557 aaPredicted RBP7.44□□□□□ -1.22
LRRC39-204ENST00000620882 IL27Q8NEV9 243 aa7.4□□□□□ -1.22
LRRC39-204ENST00000620882 PAK3O75914 559 aaPredicted RBP7.4□□□□□ -1.23
LRRC39-204ENST00000620882 GPIHBP1Q8IV16 184 aa7.4□□□□□ -1.23
LRRC39-204ENST00000620882 TMEM106CQ9BVX2 250 aa7.4□□□□□ -1.23
LRRC39-204ENST00000620882 EMILIN3Q9NT22 766 aa7.4□□□□□ -1.23
LRRC39-204ENST00000620882 ZRANB1Q9UGI0 708 aa7.39□□□□□ -1.23
LRRC39-204ENST00000620882 DPYSL4O14531 572 aa7.39□□□□□ -1.23
LRRC39-204ENST00000620882 SMYD5Q6GMV2 418 aa7.38□□□□□ -1.23
LRRC39-204ENST00000620882 KDM4CQ9H3R0 1056 aa7.38□□□□□ -1.23
LRRC39-204ENST00000620882 GPR37O15354 613 aa7.37□□□□□ -1.23
LRRC39-204ENST00000620882 PPP1R15BQ5SWA1 713 aa7.37□□□□□ -1.23
LRRC39-204ENST00000620882 AK7Q96M32 723 aa7.37□□□□□ -1.23
LRRC39-204ENST00000620882 MS4A3Q96HJ5 214 aa7.36□□□□□ -1.23
LRRC39-204ENST00000620882 TRIM66O15016 1216 aa7.35□□□□□ -1.23
LRRC39-204ENST00000620882 CD44P16070 742 aaKnown RBP7.35□□□□□ -1.23
LRRC39-204ENST00000620882 DSG2Q14126 1118 aa7.35□□□□□ -1.23
LRRC39-204ENST00000620882 DPY19L2Q6NUT2 758 aa7.35□□□□□ -1.23
LRRC39-204ENST00000620882 PDE4DQ08499 809 aa7.34□□□□□ -1.23
LRRC39-204ENST00000620882 GPHNQ9NQX3 736 aaPredicted RBP7.34□□□□□ -1.23
LRRC39-204ENST00000620882 UBTFP17480 764 aaKnown RBP7.33□□□□□ -1.24
LRRC39-204ENST00000620882 ILDR1Q86SU0 546 aaPredicted RBP7.33□□□□□ -1.24
LRRC39-204ENST00000620882 KRI1Q8N9T8 703 aaKnown RBP7.33□□□□□ -1.24
LRRC39-204ENST00000620882 GOLGA2Q08379 1002 aa7.33□□□□□ -1.24
LRRC39-204ENST00000620882 FAM117AQ9C073 453 aa7.32□□□□□ -1.24
LRRC39-204ENST00000620882 PDIA6Q15084 440 aa7.31□□□□□ -1.24
LRRC39-204ENST00000620882 TTLL13PA6NNM8 815 aa7.3□□□□□ -1.24
LRRC39-204ENST00000620882 MKRN3Q13064 507 aaKnown RBP7.3□□□□□ -1.24
LRRC39-204ENST00000620882 C1orf115Q9H7X2 142 aa7.29□□□□□ -1.24
LRRC39-204ENST00000620882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.29□□□□□ -1.24
LRRC39-204ENST00000620882 PLEKHG3A1L390 1219 aa7.28□□□□□ -1.24
LRRC39-204ENST00000620882 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
LRRC39-204ENST00000620882 FECHP22830 423 aa7.27□□□□□ -1.25
LRRC39-204ENST00000620882 BMP2KQ9NSY1 1161 aaPredicted RBP7.27□□□□□ -1.25
LRRC39-204ENST00000620882 MICALL2Q8IY33 904 aa7.26□□□□□ -1.25
LRRC39-204ENST00000620882 ZMYND15Q9H091 742 aa7.26□□□□□ -1.25
LRRC39-204ENST00000620882 PDCD7Q8N8D1 485 aaKnown RBP7.25□□□□□ -1.25
LRRC39-204ENST00000620882 CCDC102AQ96A19 550 aa7.25□□□□□ -1.25
LRRC39-204ENST00000620882 GRXCR2A6NFK2 248 aa7.24□□□□□ -1.25
LRRC39-204ENST00000620882 FOXK1P85037 733 aa7.24□□□□□ -1.25
LRRC39-204ENST00000620882 PARP9Q8IXQ6 854 aa7.24□□□□□ -1.25
LRRC39-204ENST00000620882 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
LRRC39-204ENST00000620882 PRIM1P49642 420 aaKnown RBP7.24□□□□□ -1.25
LRRC39-204ENST00000620882 C2orf72A6NCS6 295 aa7.22□□□□□ -1.25
LRRC39-204ENST00000620882 ZNF316A6NFI3 1004 aaPredicted RBP7.22□□□□□ -1.25
LRRC39-204ENST00000620882 PLPP6Q8IY26 295 aa7.22□□□□□ -1.25
LRRC39-204ENST00000620882 ARID3CA6NKF2 412 aa7.22□□□□□ -1.25
LRRC39-204ENST00000620882 SPDYE16A6NNV3 312 aaPredicted RBP7.22□□□□□ -1.25
LRRC39-204ENST00000620882 POTEB2H3BUK9 544 aa7.22□□□□□ -1.25
LRRC39-204ENST00000620882 GALR2O43603 387 aaPredicted RBP7.22□□□□□ -1.25
LRRC39-204ENST00000620882 TIE1P35590 1138 aa7.22□□□□□ -1.25
LRRC39-204ENST00000620882 NUTM2FA1L443 756 aa7.21□□□□□ -1.26
LRRC39-204ENST00000620882 KIF3CO14782 793 aa7.21□□□□□ -1.26
LRRC39-204ENST00000620882 OSBPP22059 807 aa7.21□□□□□ -1.26
LRRC39-204ENST00000620882 MMRN1Q13201 1228 aa7.21□□□□□ -1.26
LRRC39-204ENST00000620882 CDAN1Q8IWY9 1227 aa7.21□□□□□ -1.26
LRRC39-204ENST00000620882 ARID3AQ99856 593 aa7.21□□□□□ -1.26
LRRC39-204ENST00000620882 IRF6O14896 467 aa7.2□□□□□ -1.26
LRRC39-204ENST00000620882 RSPH6AQ9H0K4 717 aa7.2□□□□□ -1.26
LRRC39-204ENST00000620882 MAP2K5Q13163 448 aa7.2□□□□□ -1.26
LRRC39-204ENST00000620882 UPF1Q92900 1129 aaKnown RBP eCLIP7.2□□□□□ -1.26
LRRC39-204ENST00000620882 PODXL2Q9NZ53 605 aa7.2□□□□□ -1.26
LRRC39-204ENST00000620882 TMC2Q8TDI7 906 aa7.19□□□□□ -1.26
LRRC39-204ENST00000620882 DDX12PQ92771 950 aa7.19□□□□□ -1.26
LRRC39-204ENST00000620882 DCBLD2Q96PD2 775 aa7.19□□□□□ -1.26
LRRC39-204ENST00000620882 MINK1Q8N4C8 1332 aaPredicted RBP7.19□□□□□ -1.26
LRRC39-204ENST00000620882 AMHR2Q16671 573 aa7.19□□□□□ -1.26
LRRC39-204ENST00000620882 TMEM92Q6UXU6 159 aa7.19□□□□□ -1.26
LRRC39-204ENST00000620882 REPIN1Q9BWE0 567 aaKnown RBP7.18□□□□□ -1.26
LRRC39-204ENST00000620882 TRIM26Q12899 539 aaPredicted RBP7.17□□□□□ -1.26
LRRC39-204ENST00000620882 FAM163AQ96GL9 167 aaPredicted RBP7.17□□□□□ -1.26
LRRC39-204ENST00000620882 TMEM121BQ9BXQ6 578 aaPredicted RBP7.17□□□□□ -1.26
LRRC39-204ENST00000620882 GNPATO15228 680 aa7.17□□□□□ -1.26
LRRC39-204ENST00000620882 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
LRRC39-204ENST00000620882 MS4A1P11836 297 aa7.16□□□□□ -1.26
LRRC39-204ENST00000620882 ATN1P54259 1190 aaPredicted RBP7.15□□□□□ -1.26
LRRC39-204ENST00000620882 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
LRRC39-204ENST00000620882 HRCP23327 699 aa7.15□□□□□ -1.27
LRRC39-204ENST00000620882 MAP3K9P80192 1104 aa7.15□□□□□ -1.27
LRRC39-204ENST00000620882 DDRGK1Q96HY6 314 aa7.14□□□□□ -1.27
LRRC39-204ENST00000620882 BOLA1Q9Y3E2 137 aa7.13□□□□□ -1.27
LRRC39-204ENST00000620882 CLCN6P51797 869 aa7.13□□□□□ -1.27
LRRC39-204ENST00000620882 TTLL12Q14166 644 aaPredicted RBP7.13□□□□□ -1.27
LRRC39-204ENST00000620882 CLUAP1Q96AJ1 413 aa7.13□□□□□ -1.27
LRRC39-204ENST00000620882 APBB1O00213 710 aa7.12□□□□□ -1.27
LRRC39-204ENST00000620882 PTGDRQ13258 359 aa7.12□□□□□ -1.27
LRRC39-204ENST00000620882 HIC1Q14526 733 aa7.12□□□□□ -1.27
LRRC39-204ENST00000620882 GIGYF2Q6Y7W6 1299 aaKnown RBP7.12□□□□□ -1.27
LRRC39-204ENST00000620882 OXER1Q8TDS5 423 aa7.12□□□□□ -1.27
LRRC39-204ENST00000620882 PHOX2BQ99453 314 aa7.11□□□□□ -1.27
LRRC39-204ENST00000620882 CDHR5Q9HBB8 845 aa7.11□□□□□ -1.27
LRRC39-204ENST00000620882 PTGER2P43116 358 aa7.1□□□□□ -1.27
LRRC39-204ENST00000620882 FCHSD2O94868 740 aa7.09□□□□□ -1.27
LRRC39-204ENST00000620882 OCEL1Q9H607 264 aa7.08□□□□□ -1.28
LRRC39-204ENST00000620882 NPDC1Q9NQX5 325 aaPredicted RBP7.08□□□□□ -1.28
LRRC39-204ENST00000620882 ATMINO43313 823 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms