RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 FANCAO15360 1455 aa9.44□□□□□ -0.9
FMR1-217ENST00000620828 MAGI2Q86UL8 1455 aa9.44□□□□□ -0.9
FMR1-217ENST00000620828 AKNAQ7Z591 1439 aa9.43□□□□□ -0.9
FMR1-217ENST00000620828 DIP2CQ9Y2E4 1556 aa9.43□□□□□ -0.9
FMR1-217ENST00000620828 GPATCH8Q9UKJ3 1502 aaKnown RBP9.43□□□□□ -0.9
FMR1-217ENST00000620828 ADGBQ8N7X0 1667 aa9.43□□□□□ -0.9
FMR1-217ENST00000620828 HECW2Q9P2P5 1572 aa9.42□□□□□ -0.9
FMR1-217ENST00000620828 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
FMR1-217ENST00000620828 CROCC2H7BZ55 1655 aa9.42□□□□□ -0.9
FMR1-217ENST00000620828 VPS8Q8N3P4 1428 aa9.41□□□□□ -0.9
FMR1-217ENST00000620828 MLH3Q9UHC1 1453 aa9.4□□□□□ -0.9
FMR1-217ENST00000620828 MAST1Q9Y2H9 1570 aa9.4□□□□□ -0.9
FMR1-217ENST00000620828 ARHGEF5Q12774 1597 aa9.4□□□□□ -0.91
FMR1-217ENST00000620828 ADGRL1O94910 1474 aa9.39□□□□□ -0.91
FMR1-217ENST00000620828 AGLP35573 1532 aa9.39□□□□□ -0.91
FMR1-217ENST00000620828 MBD5Q9P267 1494 aa9.39□□□□□ -0.91
FMR1-217ENST00000620828 ZFYVE16Q7Z3T8 1539 aa9.39□□□□□ -0.91
FMR1-217ENST00000620828 KDM4FA0A1W2PPD8 638 aa9.39□□□□□ -0.91
FMR1-217ENST00000620828 DENND4BO75064 1496 aaPredicted RBP9.38□□□□□ -0.91
FMR1-217ENST00000620828 KIAA1107Q9UPP5 1409 aa9.38□□□□□ -0.91
FMR1-217ENST00000620828 MROH2AA6NES4 1674 aa9.38□□□□□ -0.91
FMR1-217ENST00000620828 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
FMR1-217ENST00000620828 UBTFP17480 764 aaKnown RBP9.36□□□□□ -0.91
FMR1-217ENST00000620828 MADDQ8WXG6 1647 aa9.36□□□□□ -0.91
FMR1-217ENST00000620828 ZNF518AQ6AHZ1 1483 aa9.36□□□□□ -0.91
FMR1-217ENST00000620828 FER1L4A9Z1Z3 1794 aa9.35□□□□□ -0.91
FMR1-217ENST00000620828 ARHGAP5Q13017 1502 aa9.35□□□□□ -0.91
FMR1-217ENST00000620828 SYCP2Q9BX26 1530 aa9.35□□□□□ -0.91
FMR1-217ENST00000620828 YEATS2Q9ULM3 1422 aa9.35□□□□□ -0.91
FMR1-217ENST00000620828 TTBK1Q5TCY1 1321 aaPredicted RBP9.34□□□□□ -0.91
FMR1-217ENST00000620828 PLEKHD1A6NEE1 506 aa9.34□□□□□ -0.91
FMR1-217ENST00000620828 TCOF1Q13428 1488 aaKnown RBP9.34□□□□□ -0.91
FMR1-217ENST00000620828 NCOA2Q15596 1464 aa9.34□□□□□ -0.91
FMR1-217ENST00000620828 TRAPPC8Q9Y2L5 1435 aa9.33□□□□□ -0.92
FMR1-217ENST00000620828 RNF17Q9BXT8 1623 aaKnown RBP9.33□□□□□ -0.92
FMR1-217ENST00000620828 MROH1Q8NDA8 1641 aa9.32□□□□□ -0.92
FMR1-217ENST00000620828 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 ATP10AO60312 1499 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 ATP7AQ04656 1500 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 KCNH8Q96L42 1107 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 DEPDC5O75140 1603 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 C3P01024 1663 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 RIMS1Q86UR5 1692 aaKnown RBP9.31□□□□□ -0.92
FMR1-217ENST00000620828 EIF2AK4Q9P2K8 1649 aaKnown RBP9.31□□□□□ -0.92
FMR1-217ENST00000620828 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
FMR1-217ENST00000620828 C9orf84Q5VXU9 1444 aa9.3□□□□□ -0.92
FMR1-217ENST00000620828 FAM135AQ9P2D6 1515 aa9.3□□□□□ -0.92
FMR1-217ENST00000620828 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
FMR1-217ENST00000620828 RTEL1-TNFRSF6BF6WH68 1400 aa9.3□□□□□ -0.92
FMR1-217ENST00000620828 DNMT1P26358 1616 aaKnown RBP9.29□□□□□ -0.92
FMR1-217ENST00000620828 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
FMR1-217ENST00000620828 ZNF142P52746 1687 aaPredicted RBP9.29□□□□□ -0.92
FMR1-217ENST00000620828 ARID3CA6NKF2 412 aa9.28□□□□□ -0.92
FMR1-217ENST00000620828 MIA2Q96PC5 1412 aa9.28□□□□□ -0.92
FMR1-217ENST00000620828 PTPRMP28827 1452 aa9.27□□□□□ -0.93
FMR1-217ENST00000620828 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.93
FMR1-217ENST00000620828 RAPGEF3O95398 923 aa9.27□□□□□ -0.93
FMR1-217ENST00000620828 SHANK2Q9UPX8 1470 aa9.27□□□□□ -0.93
FMR1-217ENST00000620828 PREX1Q8TCU6 1659 aa9.27□□□□□ -0.93
FMR1-217ENST00000620828 VWDEQ8N2E2 1590 aa9.26□□□□□ -0.93
FMR1-217ENST00000620828 ZC3H13Q5T200 1668 aaKnown RBP9.26□□□□□ -0.93
FMR1-217ENST00000620828 CDK11AQ9UQ88 783 aaPredicted RBP9.25□□□□□ -0.93
FMR1-217ENST00000620828 KDM5DQ9BY66 1539 aa9.25□□□□□ -0.93
FMR1-217ENST00000620828 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
FMR1-217ENST00000620828 RANGAP1P46060 587 aaPredicted RBP9.24□□□□□ -0.93
FMR1-217ENST00000620828 STRCQ7RTU9 1775 aa9.24□□□□□ -0.93
FMR1-217ENST00000620828 EFCAB2Q5VUJ9 269 aa9.24□□□□□ -0.93
FMR1-217ENST00000620828 LMTK3Q96Q04 1460 aa9.23□□□□□ -0.93
FMR1-217ENST00000620828 CLTCQ00610 1675 aaKnown RBP9.23□□□□□ -0.93
FMR1-217ENST00000620828 CCDC141Q6ZP82 1450 aa9.23□□□□□ -0.93
FMR1-217ENST00000620828 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
FMR1-217ENST00000620828 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
FMR1-217ENST00000620828 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
FMR1-217ENST00000620828 CCNB3Q8WWL7 1395 aa9.2□□□□□ -0.94
FMR1-217ENST00000620828 MTUS2Q5JR59 1369 aa9.2□□□□□ -0.94
FMR1-217ENST00000620828 MYO3AQ8NEV4 1616 aa9.2□□□□□ -0.94
FMR1-217ENST00000620828 EHMT2Q96KQ7 1210 aa9.19□□□□□ -0.94
FMR1-217ENST00000620828 A2MP01023 1474 aa9.19□□□□□ -0.94
FMR1-217ENST00000620828 KDM5AP29375 1690 aaKnown RBP9.18□□□□□ -0.94
FMR1-217ENST00000620828 UNC13BO14795 1591 aa9.18□□□□□ -0.94
FMR1-217ENST00000620828 ABCC5O15440 1437 aa9.18□□□□□ -0.94
FMR1-217ENST00000620828 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
FMR1-217ENST00000620828 AFAP1Q8N556 730 aa9.18□□□□□ -0.94
FMR1-217ENST00000620828 LMTK2Q8IWU2 1503 aa9.18□□□□□ -0.94
FMR1-217ENST00000620828 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
FMR1-217ENST00000620828 CAMSAP1Q5T5Y3 1602 aa9.17□□□□□ -0.94
FMR1-217ENST00000620828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.17□□□□□ -0.94
FMR1-217ENST00000620828 CEP152O94986 1710 aa9.17□□□□□ -0.94
FMR1-217ENST00000620828 DUOX2Q9NRD8 1548 aa9.16□□□□□ -0.94
FMR1-217ENST00000620828 SPATA31D1Q6ZQQ2 1576 aa9.16□□□□□ -0.94
FMR1-217ENST00000620828 DAPK1P53355 1430 aa9.15□□□□□ -0.94
FMR1-217ENST00000620828 NPATQ14207 1427 aa9.15□□□□□ -0.94
FMR1-217ENST00000620828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
FMR1-217ENST00000620828 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
FMR1-217ENST00000620828 DHX29Q7Z478 1369 aaKnown RBP9.15□□□□□ -0.94
FMR1-217ENST00000620828 ABCC3O15438 1527 aa9.15□□□□□ -0.95
FMR1-217ENST00000620828 GCC2Q8IWJ2 1684 aa9.14□□□□□ -0.95
FMR1-217ENST00000620828 SETD1BQ9UPS6 1966 aaKnown RBP9.14□□□□□ -0.95
FMR1-217ENST00000620828 PTPRKQ15262 1439 aa9.14□□□□□ -0.95
FMR1-217ENST00000620828 CNTLNQ9NXG0 1405 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms