RNA–Protein interactions for RNA: ENST00000616983.4

GYPA-212, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GYPA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-212ENST00000616983 MIER1Q8N108 512 aa8.66□□□□□ -1.02
GYPA-212ENST00000616983 ZNF316A6NFI3 1004 aaPredicted RBP8.66□□□□□ -1.02
GYPA-212ENST00000616983 PPM1GO15355 546 aaPredicted RBP8.65□□□□□ -1.02
GYPA-212ENST00000616983 FXR2P51116 673 aaKnown RBP eCLIP8.65□□□□□ -1.02
GYPA-212ENST00000616983 CCDC97Q96F63 343 aaPredicted RBP8.65□□□□□ -1.02
GYPA-212ENST00000616983 PDE4DQ08499 809 aa8.65□□□□□ -1.02
GYPA-212ENST00000616983 PITPNM1O00562 1244 aa8.64□□□□□ -1.03
GYPA-212ENST00000616983 OSCARQ8IYS5 282 aa8.64□□□□□ -1.03
GYPA-212ENST00000616983 FAM117AQ9C073 453 aa8.64□□□□□ -1.03
GYPA-212ENST00000616983 ZNF777Q9ULD5 760 aaPredicted RBP8.64□□□□□ -1.03
GYPA-212ENST00000616983 CWC22Q9HCG8 908 aaKnown RBP8.63□□□□□ -1.03
GYPA-212ENST00000616983 TRIM66O15016 1216 aa8.63□□□□□ -1.03
GYPA-212ENST00000616983 BCCIPQ9P287 314 aaKnown RBP eCLIP8.62□□□□□ -1.03
GYPA-212ENST00000616983 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
GYPA-212ENST00000616983 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
GYPA-212ENST00000616983 PATL2C9JE40 543 aaKnown RBP8.6□□□□□ -1.03
GYPA-212ENST00000616983 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
GYPA-212ENST00000616983 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
GYPA-212ENST00000616983 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
GYPA-212ENST00000616983 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
GYPA-212ENST00000616983 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
GYPA-212ENST00000616983 CERS3Q8IU89 383 aa8.58□□□□□ -1.04
GYPA-212ENST00000616983 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
GYPA-212ENST00000616983 FNBP4Q8N3X1 1017 aaPredicted RBP8.57□□□□□ -1.04
GYPA-212ENST00000616983 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
GYPA-212ENST00000616983 E2F4Q16254 413 aa8.56□□□□□ -1.04
GYPA-212ENST00000616983 CC2D2BQ6DHV5 1058 aa8.56□□□□□ -1.04
GYPA-212ENST00000616983 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
GYPA-212ENST00000616983 GSE1Q14687 1217 aa8.55□□□□□ -1.04
GYPA-212ENST00000616983 SGIP1Q9BQI5 828 aa8.55□□□□□ -1.04
GYPA-212ENST00000616983 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
GYPA-212ENST00000616983 EVX2Q03828 476 aa8.54□□□□□ -1.04
GYPA-212ENST00000616983 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
GYPA-212ENST00000616983 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
GYPA-212ENST00000616983 BCL11BQ9C0K0 894 aaPredicted RBP8.54□□□□□ -1.04
GYPA-212ENST00000616983 ARID4BQ4LE39 1312 aaPredicted RBP8.54□□□□□ -1.04
GYPA-212ENST00000616983 MCM6Q14566 821 aa8.53□□□□□ -1.04
GYPA-212ENST00000616983 PSMD1Q99460 953 aa8.53□□□□□ -1.04
GYPA-212ENST00000616983 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
GYPA-212ENST00000616983 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.52□□□□□ -1.04
GYPA-212ENST00000616983 KCNA1Q09470 495 aa8.52□□□□□ -1.05
GYPA-212ENST00000616983 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
GYPA-212ENST00000616983 UNCXA6NJT0 531 aa8.51□□□□□ -1.05
GYPA-212ENST00000616983 CCDC27Q2M243 656 aa8.51□□□□□ -1.05
GYPA-212ENST00000616983 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
GYPA-212ENST00000616983 PPP1R15AO75807 674 aaPredicted RBP8.5□□□□□ -1.05
GYPA-212ENST00000616983 CLSTN1O94985 981 aa8.5□□□□□ -1.05
GYPA-212ENST00000616983 PLSCR2Q9NRY7 297 aa8.5□□□□□ -1.05
GYPA-212ENST00000616983 NEFLP07196 543 aa8.5□□□□□ -1.05
GYPA-212ENST00000616983 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
GYPA-212ENST00000616983 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
GYPA-212ENST00000616983 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.47□□□□□ -1.05
GYPA-212ENST00000616983 BRD1O95696 1058 aa8.47□□□□□ -1.05
GYPA-212ENST00000616983 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
GYPA-212ENST00000616983 SPATA32Q96LK8 384 aa8.46□□□□□ -1.05
GYPA-212ENST00000616983 POM121Q96HA1 1249 aa8.45□□□□□ -1.06
GYPA-212ENST00000616983 BCL11AQ9H165 835 aa8.45□□□□□ -1.06
GYPA-212ENST00000616983 RBM26Q5T8P6 1007 aaKnown RBP8.44□□□□□ -1.06
GYPA-212ENST00000616983 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
GYPA-212ENST00000616983 SMARCA5O60264 1052 aaPredicted RBP8.44□□□□□ -1.06
GYPA-212ENST00000616983 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
GYPA-212ENST00000616983 SPDYE2Q495Y8 402 aa8.44□□□□□ -1.06
GYPA-212ENST00000616983 ACIN1Q9UKV3 1341 aaKnown RBP8.44□□□□□ -1.06
GYPA-212ENST00000616983 ANKRD13AQ8IZ07 590 aa8.43□□□□□ -1.06
GYPA-212ENST00000616983 TMED8Q6PL24 325 aaPredicted RBP8.42□□□□□ -1.06
GYPA-212ENST00000616983 SND1Q7KZF4 910 aaKnown RBP eCLIP8.41□□□□□ -1.063e-7■■■■□ 23.9
GYPA-212ENST00000616983 RBM47A0AV96 593 aaKnown RBP8.41□□□□□ -1.06
GYPA-212ENST00000616983 KDM4AO75164 1064 aa8.41□□□□□ -1.06
GYPA-212ENST00000616983 PRKAR2AP13861 404 aaKnown RBP8.4□□□□□ -1.06
GYPA-212ENST00000616983 NCLP19338 710 aaKnown RBP8.4□□□□□ -1.06
GYPA-212ENST00000616983 C19orf67A6NJJ6 358 aa8.39□□□□□ -1.07
GYPA-212ENST00000616983 PCMTD1Q96MG8 357 aaPredicted RBP8.38□□□□□ -1.07
GYPA-212ENST00000616983 DRC1Q96MC2 740 aa8.38□□□□□ -1.07
GYPA-212ENST00000616983 PRDM16Q9HAZ2 1276 aa8.38□□□□□ -1.07
GYPA-212ENST00000616983 SPDYE1Q8NFV5 336 aaPredicted RBP8.37□□□□□ -1.07
GYPA-212ENST00000616983 NUBP1P53384 320 aa8.37□□□□□ -1.07
GYPA-212ENST00000616983 KIAA1522Q9P206 1035 aaPredicted RBP8.36□□□□□ -1.07
GYPA-212ENST00000616983 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
GYPA-212ENST00000616983 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
GYPA-212ENST00000616983 CHRM1P11229 460 aaPredicted RBP8.35□□□□□ -1.07
GYPA-212ENST00000616983 DCAF8Q5TAQ9 597 aa8.35□□□□□ -1.07
GYPA-212ENST00000616983 USTQ9Y2C2 406 aa8.35□□□□□ -1.07
GYPA-212ENST00000616983 ZC3H4Q9UPT8 1303 aaKnown RBP8.35□□□□□ -1.07
GYPA-212ENST00000616983 GABBR2O75899 941 aa8.34□□□□□ -1.07
GYPA-212ENST00000616983 AMHR2Q16671 573 aa8.34□□□□□ -1.07
GYPA-212ENST00000616983 CLEC11AQ9Y240 323 aa8.34□□□□□ -1.07
GYPA-212ENST00000616983 LHX8Q68G74 356 aa8.33□□□□□ -1.08
GYPA-212ENST00000616983 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
GYPA-212ENST00000616983 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
GYPA-212ENST00000616983 SREK1Q8WXA9 508 aaKnown RBP8.33□□□□□ -1.08
GYPA-212ENST00000616983 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
GYPA-212ENST00000616983 COG6Q9Y2V7 657 aa8.32□□□□□ -1.08
GYPA-212ENST00000616983 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
GYPA-212ENST00000616983 NOL8Q76FK4 1167 aaKnown RBP8.31□□□□□ -1.08
GYPA-212ENST00000616983 MRRFQ96E11 262 aaKnown RBP8.31□□□□□ -1.08
GYPA-212ENST00000616983 C8orf37Q96NL8 207 aa8.31□□□□□ -1.08
GYPA-212ENST00000616983 PLEKHD1A6NEE1 506 aa8.3□□□□□ -1.08
GYPA-212ENST00000616983 LOC102724159A0A0B4J2E5 919 aa8.3□□□□□ -1.08
GYPA-212ENST00000616983 ANKRD62A6NC57 917 aa8.3□□□□□ -1.08
GYPA-212ENST00000616983 PWP2Q15269 919 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms