RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 PCMTD1Q96MG8 357 aaPredicted RBP2.66□□□□□ -1.98
BRCA2-207ENST00000614259 USTQ9Y2C2 406 aa2.66□□□□□ -1.98
BRCA2-207ENST00000614259 MCCD1P59942 119 aaPredicted RBP2.66□□□□□ -1.98
BRCA2-207ENST00000614259 KCNV2Q8TDN2 545 aa2.66□□□□□ -1.98
BRCA2-207ENST00000614259 KCNA1Q09470 495 aa2.66□□□□□ -1.98
BRCA2-207ENST00000614259 SOX11P35716 441 aa2.65□□□□□ -1.98
BRCA2-207ENST00000614259 TBC1D12O60347 775 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 EPAS1Q99814 870 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 PSEN1P49768 467 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 ILDR1Q86SU0 546 aaPredicted RBP2.65□□□□□ -1.99
BRCA2-207ENST00000614259 RNF25Q96BH1 459 aaPredicted RBP2.65□□□□□ -1.99
BRCA2-207ENST00000614259 SPINK5Q9NQ38 1064 aaPredicted RBP2.65□□□□□ -1.99
BRCA2-207ENST00000614259 RBM27Q9P2N5 1060 aaKnown RBP2.65□□□□□ -1.99
BRCA2-207ENST00000614259 TTBK1Q5TCY1 1321 aaPredicted RBP2.65□□□□□ -1.99
BRCA2-207ENST00000614259 FCHSD2O94868 740 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 FGD1P98174 961 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 HIC1Q14526 733 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 PDIA6Q15084 440 aa2.65□□□□□ -1.99
BRCA2-207ENST00000614259 SH3D19Q5HYK7 790 aa2.64□□□□□ -1.99
BRCA2-207ENST00000614259 TRIM66O15016 1216 aa2.64□□□□□ -1.99
BRCA2-207ENST00000614259 RAD21O60216 631 aa2.64□□□□□ -1.99
BRCA2-207ENST00000614259 KRI1Q8N9T8 703 aaKnown RBP2.64□□□□□ -1.99
BRCA2-207ENST00000614259 MAP2K5Q13163 448 aa2.64□□□□□ -1.99
BRCA2-207ENST00000614259 PNMA1Q8ND90 353 aa2.64□□□□□ -1.99
BRCA2-207ENST00000614259 DDX27Q96GQ7 796 aaKnown RBP2.64□□□□□ -1.99
BRCA2-207ENST00000614259 GPIHBP1Q8IV16 184 aa2.63□□□□□ -1.99
BRCA2-207ENST00000614259 FBXO22Q8NEZ5 403 aa2.63□□□□□ -1.99
BRCA2-207ENST00000614259 PODXL2Q9NZ53 605 aa2.63□□□□□ -1.99
BRCA2-207ENST00000614259 ONECUT3O60422 494 aaPredicted RBP2.63□□□□□ -1.99
BRCA2-207ENST00000614259 GPHNQ9NQX3 736 aaPredicted RBP2.63□□□□□ -1.99
BRCA2-207ENST00000614259 SHROOM4Q9ULL8 1493 aa2.63□□□□□ -1.99
BRCA2-207ENST00000614259 SKIV2LQ15477 1246 aaKnown RBP2.62□□□□□ -1.99
BRCA2-207ENST00000614259 LZTS3O60299 673 aaPredicted RBP2.62□□□□□ -1.99
BRCA2-207ENST00000614259 SPDYE5A6NIY4 337 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 OATP04181 439 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 PDE4DQ08499 809 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 NECTIN2Q92692 538 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 PPP2R2DQ66LE6 453 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 CLCN1P35523 988 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 COL19A1Q14993 1142 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 L3MBTL3Q96JM7 780 aaPredicted RBP2.62□□□□□ -1.99
BRCA2-207ENST00000614259 IER5LQ5T953 404 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 OSCARQ8IYS5 282 aa2.62□□□□□ -1.99
BRCA2-207ENST00000614259 TRAK2O60296 914 aa2.61□□□□□ -1.99
BRCA2-207ENST00000614259 TIE1P35590 1138 aa2.61□□□□□ -1.99
BRCA2-207ENST00000614259 WASHC4Q2M389 1173 aa2.61□□□□□ -1.99
BRCA2-207ENST00000614259 SLC34A2O95436 690 aa2.61□□□□□ -1.99
BRCA2-207ENST00000614259 CCDC97Q96F63 343 aaPredicted RBP2.61□□□□□ -1.99
BRCA2-207ENST00000614259 FBXW7Q969H0 707 aa2.61□□□□□ -1.99
BRCA2-207ENST00000614259 MFRPQ9BY79 579 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 KDM4CQ9H3R0 1056 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 IRF6O14896 467 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 REM2Q8IYK8 340 aaPredicted RBP2.6□□□□□ -1.99
BRCA2-207ENST00000614259 GNPATO15228 680 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 BRD1O95696 1058 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 RSPH4AQ5TD94 716 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 FOXK1P85037 733 aa2.6□□□□□ -1.99
BRCA2-207ENST00000614259 ANO8Q9HCE9 1232 aaPredicted RBP2.59□□□□□ -1.99
BRCA2-207ENST00000614259 RASEFQ8IZ41 740 aa2.59□□□□□ -1.99
BRCA2-207ENST00000614259 TMUB1Q9BVT8 246 aa2.59□□□□□ -2
BRCA2-207ENST00000614259 GOLGA2Q08379 1002 aa2.59□□□□□ -2
BRCA2-207ENST00000614259 USP46P62068 366 aa2.58□□□□□ -2
BRCA2-207ENST00000614259 PSDA5PKW4 1024 aaPredicted RBP2.58□□□□□ -2
BRCA2-207ENST00000614259 LARP6Q9BRS8 491 aaKnown RBP2.58□□□□□ -2
BRCA2-207ENST00000614259 SLC24A3Q9HC58 644 aa2.58□□□□□ -2
BRCA2-207ENST00000614259 CDK11AQ9UQ88 783 aaPredicted RBP2.58□□□□□ -2
BRCA2-207ENST00000614259 MKRN3Q13064 507 aaKnown RBP2.58□□□□□ -2
BRCA2-207ENST00000614259 PPP1R15BQ5SWA1 713 aa2.57□□□□□ -2
BRCA2-207ENST00000614259 CCDC61Q9Y6R9 512 aa2.57□□□□□ -2
BRCA2-207ENST00000614259 PRPF38BQ5VTL8 546 aaKnown RBP2.57□□□□□ -2
BRCA2-207ENST00000614259 KIF12Q96FN5 646 aa2.57□□□□□ -2
BRCA2-207ENST00000614259 NFATC2IPQ8NCF5 419 aa2.57□□□□□ -2
BRCA2-207ENST00000614259 FARP1Q9Y4F1 1045 aaPredicted RBP2.57□□□□□ -2
BRCA2-207ENST00000614259 UBTFP17480 764 aaKnown RBP2.56□□□□□ -2
BRCA2-207ENST00000614259 VAMP1P23763 118 aa2.56□□□□□ -2
BRCA2-207ENST00000614259 GNEQ9Y223 722 aaKnown RBP2.56□□□□□ -2
BRCA2-207ENST00000614259 PELP1Q8IZL8 1130 aaKnown RBP2.56□□□□□ -2
BRCA2-207ENST00000614259 TMEM121BQ9BXQ6 578 aaPredicted RBP2.56□□□□□ -2
BRCA2-207ENST00000614259 ZC3H4Q9UPT8 1303 aaKnown RBP2.56□□□□□ -2
BRCA2-207ENST00000614259 MTMR7Q9Y216 660 aa2.56□□□□□ -2
BRCA2-207ENST00000614259 G3V3G9 751 aa2.56□□□□□ -2
BRCA2-207ENST00000614259 E9PSI1 815 aa2.56□□□□□ -2
BRCA2-207ENST00000614259 TMC2Q8TDI7 906 aa2.56□□□□□ -2
BRCA2-207ENST00000614259 PCDHB13Q9Y5F0 798 aa2.55□□□□□ -2
BRCA2-207ENST00000614259 RNF135Q8IUD6 432 aa2.55□□□□□ -2
BRCA2-207ENST00000614259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.55□□□□□ -2
BRCA2-207ENST00000614259 ABCB7O75027 752 aa2.55□□□□□ -2
BRCA2-207ENST00000614259 SEMA3EO15041 775 aa2.55□□□□□ -2
BRCA2-207ENST00000614259 TMCO4Q5TGY1 634 aa2.55□□□□□ -2
BRCA2-207ENST00000614259 PROSER2Q86WR7 435 aaPredicted RBP2.55□□□□□ -2
BRCA2-207ENST00000614259 FNBP4Q8N3X1 1017 aaPredicted RBP2.55□□□□□ -2
BRCA2-207ENST00000614259 PHF14O94880 888 aa2.54□□□□□ -2
BRCA2-207ENST00000614259 PTCD2Q8WV60 388 aaKnown RBP2.54□□□□□ -2
BRCA2-207ENST00000614259 GPCPD1Q9NPB8 672 aa2.54□□□□□ -2
BRCA2-207ENST00000614259 C8orf37Q96NL8 207 aa2.54□□□□□ -2
BRCA2-207ENST00000614259 ELOAQ14241 798 aaKnown RBP2.54□□□□□ -2
BRCA2-207ENST00000614259 ZSWIM6Q9HCJ5 1215 aa2.54□□□□□ -2
BRCA2-207ENST00000614259 CADPS2Q86UW7 1296 aa2.54□□□□□ -2
BRCA2-207ENST00000614259 ZNF330Q9Y3S2 320 aaPredicted RBP2.54□□□□□ -2
BRCA2-207ENST00000614259 FXR2P51116 673 aaKnown RBP eCLIP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms