RNA–Protein interactions for RNA: ENST00000594752.5

LINC00649-206, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 489 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-206ENST00000594752 PDE4DQ08499 809 aa10.11□□□□□ -0.79
LINC00649-206ENST00000594752 DDX27Q96GQ7 796 aaKnown RBP10.11□□□□□ -0.79
LINC00649-206ENST00000594752 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
LINC00649-206ENST00000594752 HRCP23327 699 aa10.08□□□□□ -0.8
LINC00649-206ENST00000594752 IFNL1Q8IU54 200 aa10.08□□□□□ -0.8
LINC00649-206ENST00000594752 PIP4P2Q8N4L2 257 aa10.08□□□□□ -0.8
LINC00649-206ENST00000594752 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
LINC00649-206ENST00000594752 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
LINC00649-206ENST00000594752 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
LINC00649-206ENST00000594752 ARID3AQ99856 593 aa10.05□□□□□ -0.8
LINC00649-206ENST00000594752 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
LINC00649-206ENST00000594752 MAP3K13O43283 966 aa10□□□□□ -0.81
LINC00649-206ENST00000594752 ZNF316A6NFI3 1004 aaPredicted RBP9.99□□□□□ -0.81
LINC00649-206ENST00000594752 GPR37O15354 613 aa9.98□□□□□ -0.81
LINC00649-206ENST00000594752 NPM2Q86SE8 214 aaKnown RBP9.98□□□□□ -0.81
LINC00649-206ENST00000594752 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
LINC00649-206ENST00000594752 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
LINC00649-206ENST00000594752 HAX1O00165 279 aa9.97□□□□□ -0.81
LINC00649-206ENST00000594752 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
LINC00649-206ENST00000594752 APBB1O00213 710 aa9.95□□□□□ -0.82
LINC00649-206ENST00000594752 FLIIQ13045 1269 aa9.95□□□□□ -0.82
LINC00649-206ENST00000594752 PPP1R15BQ5SWA1 713 aa9.95□□□□□ -0.82
LINC00649-206ENST00000594752 DDRGK1Q96HY6 314 aa9.95□□□□□ -0.82
LINC00649-206ENST00000594752 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
LINC00649-206ENST00000594752 PDIA6Q15084 440 aa9.94□□□□□ -0.82
LINC00649-206ENST00000594752 SPDYE16A6NNV3 312 aaPredicted RBP9.93□□□□□ -0.82
LINC00649-206ENST00000594752 DPYSL4O14531 572 aa9.92□□□□□ -0.82
LINC00649-206ENST00000594752 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
LINC00649-206ENST00000594752 EMILIN3Q9NT22 766 aa9.91□□□□□ -0.82
LINC00649-206ENST00000594752 ZRANB1Q9UGI0 708 aa9.91□□□□□ -0.82
LINC00649-206ENST00000594752 ONECUT3O60422 494 aaPredicted RBP9.9□□□□□ -0.82
LINC00649-206ENST00000594752 AMHR2Q16671 573 aa9.9□□□□□ -0.82
LINC00649-206ENST00000594752 GPHNQ9NQX3 736 aaPredicted RBP9.9□□□□□ -0.82
LINC00649-206ENST00000594752 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
LINC00649-206ENST00000594752 CCDC102AQ96A19 550 aa9.89□□□□□ -0.83
LINC00649-206ENST00000594752 MAP2K5Q13163 448 aa9.88□□□□□ -0.83
LINC00649-206ENST00000594752 PARP9Q8IXQ6 854 aa9.88□□□□□ -0.83
LINC00649-206ENST00000594752 PDIA4P13667 645 aaKnown RBP9.87□□□□□ -0.83
LINC00649-206ENST00000594752 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
LINC00649-206ENST00000594752 PHF12Q96QT6 1004 aa9.86□□□□□ -0.83
LINC00649-206ENST00000594752 A6NJR5 290 aa9.85□□□□□ -0.83
LINC00649-206ENST00000594752 IRF6O14896 467 aa9.85□□□□□ -0.83
LINC00649-206ENST00000594752 ZCCHC6Q5VYS8 1495 aaKnown RBP9.85□□□□□ -0.83
LINC00649-206ENST00000594752 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
LINC00649-206ENST00000594752 ZBTB7CA1YPR0 619 aa9.83□□□□□ -0.84
LINC00649-206ENST00000594752 CCDC82Q8N4S0 544 aa9.83□□□□□ -0.84
LINC00649-206ENST00000594752 PLSCR2Q9NRY7 297 aa9.83□□□□□ -0.84
LINC00649-206ENST00000594752 TRAK2O60296 914 aa9.82□□□□□ -0.84
LINC00649-206ENST00000594752 CLUAP1Q96AJ1 413 aa9.82□□□□□ -0.84
LINC00649-206ENST00000594752 DSG2Q14126 1118 aa9.81□□□□□ -0.84
LINC00649-206ENST00000594752 NECTIN2Q92692 538 aa9.8□□□□□ -0.84
LINC00649-206ENST00000594752 TMEM106CQ9BVX2 250 aa9.8□□□□□ -0.84
LINC00649-206ENST00000594752 CCDC9Q9Y3X0 531 aaKnown RBP9.8□□□□□ -0.84
LINC00649-206ENST00000594752 NUTM2FA1L443 756 aa9.79□□□□□ -0.84
LINC00649-206ENST00000594752 GNPATO15228 680 aa9.79□□□□□ -0.84
LINC00649-206ENST00000594752 ILDR1Q86SU0 546 aaPredicted RBP9.78□□□□□ -0.84
LINC00649-206ENST00000594752 DCAF1Q9Y4B6 1507 aa9.77□□□□□ -0.85
LINC00649-206ENST00000594752 GRXCR2A6NFK2 248 aa9.76□□□□□ -0.85
LINC00649-206ENST00000594752 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
LINC00649-206ENST00000594752 FOXK1P85037 733 aa9.76□□□□□ -0.85
LINC00649-206ENST00000594752 HIC1Q14526 733 aa9.76□□□□□ -0.85
LINC00649-206ENST00000594752 FECHP22830 423 aa9.75□□□□□ -0.85
LINC00649-206ENST00000594752 TTLL12Q14166 644 aaPredicted RBP9.75□□□□□ -0.85
LINC00649-206ENST00000594752 MCM6Q14566 821 aa9.75□□□□□ -0.85
LINC00649-206ENST00000594752 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
LINC00649-206ENST00000594752 TRPC6Q9Y210 931 aa9.75□□□□□ -0.85
LINC00649-206ENST00000594752 FCHSD2O94868 740 aa9.73□□□□□ -0.85
LINC00649-206ENST00000594752 MS4A1P11836 297 aa9.73□□□□□ -0.85
LINC00649-206ENST00000594752 OSBPP22059 807 aa9.73□□□□□ -0.85
LINC00649-206ENST00000594752 EVX2Q03828 476 aa9.73□□□□□ -0.85
LINC00649-206ENST00000594752 MS4A3Q96HJ5 214 aa9.73□□□□□ -0.85
LINC00649-206ENST00000594752 LHX8Q68G74 356 aa9.72□□□□□ -0.85
LINC00649-206ENST00000594752 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
LINC00649-206ENST00000594752 TMC2Q8TDI7 906 aa9.7□□□□□ -0.86
LINC00649-206ENST00000594752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.7□□□□□ -0.86
LINC00649-206ENST00000594752 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
LINC00649-206ENST00000594752 PROSER2Q86WR7 435 aaPredicted RBP9.69□□□□□ -0.86
LINC00649-206ENST00000594752 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
LINC00649-206ENST00000594752 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
LINC00649-206ENST00000594752 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
LINC00649-206ENST00000594752 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
LINC00649-206ENST00000594752 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
LINC00649-206ENST00000594752 OXER1Q8TDS5 423 aa9.67□□□□□ -0.86
LINC00649-206ENST00000594752 PTGER2P43116 358 aa9.66□□□□□ -0.86
LINC00649-206ENST00000594752 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
LINC00649-206ENST00000594752 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
LINC00649-206ENST00000594752 PTGDRQ13258 359 aa9.64□□□□□ -0.87
LINC00649-206ENST00000594752 DPY19L2Q6NUT2 758 aa9.64□□□□□ -0.87
LINC00649-206ENST00000594752 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
LINC00649-206ENST00000594752 SERPINA10Q9UK55 444 aa9.64□□□□□ -0.87
LINC00649-206ENST00000594752 MYO15BQ96JP2 1530 aa9.64□□□□□ -0.87
LINC00649-206ENST00000594752 KIF3CO14782 793 aa9.63□□□□□ -0.87
LINC00649-206ENST00000594752 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
LINC00649-206ENST00000594752 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
LINC00649-206ENST00000594752 POM121Q96HA1 1249 aa9.63□□□□□ -0.87
LINC00649-206ENST00000594752 C2orf72A6NCS6 295 aa9.62□□□□□ -0.87
LINC00649-206ENST00000594752 TIE1P35590 1138 aa9.62□□□□□ -0.87
LINC00649-206ENST00000594752 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
LINC00649-206ENST00000594752 CCDC97Q96F63 343 aaPredicted RBP9.62□□□□□ -0.87
LINC00649-206ENST00000594752 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms