RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 CDC42BPBQ9Y5S2 1711 aa24.14■■□□□ 1.45
SF3A2-207ENST00000592839 KDM5CP41229 1560 aa24.12■■□□□ 1.45
SF3A2-207ENST00000592839 CEP162Q5TB80 1403 aa24.11■■□□□ 1.45
SF3A2-207ENST00000592839 BCORL1Q5H9F3 1711 aa24.1■■□□□ 1.45
SF3A2-207ENST00000592839 SCAPERQ9BY12 1400 aa24.1■■□□□ 1.45
SF3A2-207ENST00000592839 EFCAB2Q5VUJ9 269 aa24.09■■□□□ 1.45
SF3A2-207ENST00000592839 ATP1B4Q9UN42 357 aaPredicted RBP24.09■■□□□ 1.45
SF3A2-207ENST00000592839 ZFYVE16Q7Z3T8 1539 aa24.09■■□□□ 1.45
SF3A2-207ENST00000592839 CDC42BPAQ5VT25 1732 aa24.08■■□□□ 1.45
SF3A2-207ENST00000592839 ZNF518AQ6AHZ1 1483 aa24.07■■□□□ 1.44
SF3A2-207ENST00000592839 ARHGAP5Q13017 1502 aa24.07■■□□□ 1.44
SF3A2-207ENST00000592839 ABCC1P33527 1531 aa24.05■■□□□ 1.44
SF3A2-207ENST00000592839 YEATS2Q9ULM3 1422 aa24.02■■□□□ 1.44
SF3A2-207ENST00000592839 REREQ9P2R6 1566 aa24.02■■□□□ 1.44
SF3A2-207ENST00000592839 SIGLEC1Q9BZZ2 1709 aa24.01■■□□□ 1.43
SF3A2-207ENST00000592839 ITSN2Q9NZM3 1697 aa24■■□□□ 1.43
SF3A2-207ENST00000592839 MLH3Q9UHC1 1453 aa23.99■■□□□ 1.43
SF3A2-207ENST00000592839 EHBP1L1Q8N3D4 1523 aa23.99■■□□□ 1.43
SF3A2-207ENST00000592839 GPATCH8Q9UKJ3 1502 aaKnown RBP23.99■■□□□ 1.43
SF3A2-207ENST00000592839 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
SF3A2-207ENST00000592839 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
SF3A2-207ENST00000592839 PTPRMP28827 1452 aa23.96■■□□□ 1.43
SF3A2-207ENST00000592839 MADDQ8WXG6 1647 aa23.95■■□□□ 1.43
SF3A2-207ENST00000592839 ATP10AO60312 1499 aa23.95■■□□□ 1.42
SF3A2-207ENST00000592839 C9orf84Q5VXU9 1444 aa23.94■■□□□ 1.42
SF3A2-207ENST00000592839 SAMD9LQ8IVG5 1584 aa23.94■■□□□ 1.42
SF3A2-207ENST00000592839 DIP2CQ9Y2E4 1556 aa23.92■■□□□ 1.42
SF3A2-207ENST00000592839 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
SF3A2-207ENST00000592839 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
SF3A2-207ENST00000592839 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
SF3A2-207ENST00000592839 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
SF3A2-207ENST00000592839 PLEKHH2Q8IVE3 1493 aa23.89■■□□□ 1.42
SF3A2-207ENST00000592839 TRAPPC8Q9Y2L5 1435 aa23.89■■□□□ 1.41
SF3A2-207ENST00000592839 TIAM1Q13009 1591 aa23.89■■□□□ 1.41
SF3A2-207ENST00000592839 MAP3K1Q13233 1512 aa23.89■■□□□ 1.41
SF3A2-207ENST00000592839 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
SF3A2-207ENST00000592839 AGLP35573 1532 aa23.88■■□□□ 1.41
SF3A2-207ENST00000592839 KIDINS220Q9ULH0 1771 aa23.88■■□□□ 1.41
SF3A2-207ENST00000592839 AFAP1Q8N556 730 aa23.85■■□□□ 1.41
SF3A2-207ENST00000592839 SYCP2Q9BX26 1530 aa23.84■■□□□ 1.41
SF3A2-207ENST00000592839 RIMS1Q86UR5 1692 aaKnown RBP23.83■■□□□ 1.41
SF3A2-207ENST00000592839 FER1L4A9Z1Z3 1794 aa23.83■■□□□ 1.4
SF3A2-207ENST00000592839 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
SF3A2-207ENST00000592839 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
SF3A2-207ENST00000592839 SUPT6HQ7KZ85 1726 aaKnown RBP23.81■■□□□ 1.4
SF3A2-207ENST00000592839 ARID4BQ4LE39 1312 aaPredicted RBP23.81■■□□□ 1.4
SF3A2-207ENST00000592839 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
SF3A2-207ENST00000592839 NCOA2Q15596 1464 aa23.77■■□□□ 1.4
SF3A2-207ENST00000592839 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
SF3A2-207ENST00000592839 LRRC9Q6ZRR7 1453 aa23.76■■□□□ 1.39
SF3A2-207ENST00000592839 PLXNC1O60486 1568 aa23.76■■□□□ 1.39
SF3A2-207ENST00000592839 CFDP1Q9UEE9 299 aaPredicted RBP23.75■■□□□ 1.39
SF3A2-207ENST00000592839 ATP7AQ04656 1500 aa23.74■■□□□ 1.39
SF3A2-207ENST00000592839 LMTK3Q96Q04 1460 aa23.73■■□□□ 1.39
SF3A2-207ENST00000592839 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
SF3A2-207ENST00000592839 ADGBQ8N7X0 1667 aa23.67■■□□□ 1.38
SF3A2-207ENST00000592839 ARHGEF5Q12774 1597 aa23.67■■□□□ 1.38
SF3A2-207ENST00000592839 SPAG9O60271 1321 aaKnown RBP23.66■■□□□ 1.38
SF3A2-207ENST00000592839 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
SF3A2-207ENST00000592839 MROH2AA6NES4 1674 aa23.64■■□□□ 1.38
SF3A2-207ENST00000592839 HNRNPMP52272 730 aaKnown RBP eCLIP23.64■■□□□ 1.379e-7■■□□□ 12.9
SF3A2-207ENST00000592839 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.37
SF3A2-207ENST00000592839 CCDC141Q6ZP82 1450 aa23.63■■□□□ 1.37
SF3A2-207ENST00000592839 CNTLNQ9NXG0 1405 aa23.63■■□□□ 1.37
SF3A2-207ENST00000592839 SETD1BQ9UPS6 1966 aaKnown RBP23.63■■□□□ 1.37
SF3A2-207ENST00000592839 A2MP01023 1474 aa23.62■■□□□ 1.37
SF3A2-207ENST00000592839 RSPH4AQ5TD94 716 aa23.62■■□□□ 1.37
SF3A2-207ENST00000592839 PREX1Q8TCU6 1659 aa23.61■■□□□ 1.37
SF3A2-207ENST00000592839 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
SF3A2-207ENST00000592839 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
SF3A2-207ENST00000592839 C3P01024 1663 aa23.6■■□□□ 1.37
SF3A2-207ENST00000592839 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
SF3A2-207ENST00000592839 MLECQ14165 292 aa23.57■■□□□ 1.36
SF3A2-207ENST00000592839 FAM135AQ9P2D6 1515 aa23.57■■□□□ 1.36
SF3A2-207ENST00000592839 MYOM3Q5VTT5 1437 aa23.56■■□□□ 1.36
SF3A2-207ENST00000592839 KANK4Q5T7N3 995 aaPredicted RBP23.54■■□□□ 1.36
SF3A2-207ENST00000592839 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
SF3A2-207ENST00000592839 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
SF3A2-207ENST00000592839 PLPPR3Q6T4P5 718 aa23.51■■□□□ 1.35
SF3A2-207ENST00000592839 DHX29Q7Z478 1369 aaKnown RBP23.51■■□□□ 1.35
SF3A2-207ENST00000592839 NPATQ14207 1427 aa23.5■■□□□ 1.35
SF3A2-207ENST00000592839 FBXO41Q8TF61 875 aa23.5■■□□□ 1.35
SF3A2-207ENST00000592839 UHRF1BP1Q6BDS2 1440 aa23.45■■□□□ 1.34
SF3A2-207ENST00000592839 TCOF1Q13428 1488 aaKnown RBP23.44■■□□□ 1.34
SF3A2-207ENST00000592839 SHANK2Q9UPX8 1470 aa23.44■■□□□ 1.34
SF3A2-207ENST00000592839 CLTCQ00610 1675 aaKnown RBP23.44■■□□□ 1.34
SF3A2-207ENST00000592839 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
SF3A2-207ENST00000592839 EIF2AK4Q9P2K8 1649 aaKnown RBP23.43■■□□□ 1.34
SF3A2-207ENST00000592839 CROCC2H7BZ55 1655 aa23.42■■□□□ 1.34
SF3A2-207ENST00000592839 RNF17Q9BXT8 1623 aaKnown RBP23.42■■□□□ 1.34
SF3A2-207ENST00000592839 HSPA2P54652 639 aa23.42■■□□□ 1.34
SF3A2-207ENST00000592839 ZMYM3Q14202 1370 aa23.41■■□□□ 1.34
SF3A2-207ENST00000592839 ZNF142P52746 1687 aaPredicted RBP23.4■■□□□ 1.34
SF3A2-207ENST00000592839 PTPN23Q9H3S7 1636 aa23.4■■□□□ 1.34
SF3A2-207ENST00000592839 ESF1Q9H501 851 aaKnown RBP23.39■■□□□ 1.33
SF3A2-207ENST00000592839 STRCQ7RTU9 1775 aa23.38■■□□□ 1.33
SF3A2-207ENST00000592839 PTPRKQ15262 1439 aa23.38■■□□□ 1.33
SF3A2-207ENST00000592839 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
SF3A2-207ENST00000592839 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
SF3A2-207ENST00000592839 TSPY4P0CV99 314 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms