RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 POTEFA5A3E0 1075 aa11.15□□□□□ -0.62
TUBD1-208ENST00000588009 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
TUBD1-208ENST00000588009 PLCG2P16885 1265 aa11.13□□□□□ -0.63
TUBD1-208ENST00000588009 COLQQ9Y215 455 aaPredicted RBP11.13□□□□□ -0.63
TUBD1-208ENST00000588009 SEMA3EO15041 775 aa11.12□□□□□ -0.63
TUBD1-208ENST00000588009 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
TUBD1-208ENST00000588009 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
TUBD1-208ENST00000588009 PDE4AP27815 886 aa11.11□□□□□ -0.63
TUBD1-208ENST00000588009 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
TUBD1-208ENST00000588009 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
TUBD1-208ENST00000588009 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
TUBD1-208ENST00000588009 MFSD10Q14728 455 aa11.08□□□□□ -0.64
TUBD1-208ENST00000588009 POTEMA6NI47 508 aa11.07□□□□□ -0.64
TUBD1-208ENST00000588009 OCEL1Q9H607 264 aa11.07□□□□□ -0.64
TUBD1-208ENST00000588009 BRPF1P55201 1214 aaPredicted RBP11.06□□□□□ -0.64
TUBD1-208ENST00000588009 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
TUBD1-208ENST00000588009 CRISPLD2Q9H0B8 497 aa11.06□□□□□ -0.64
TUBD1-208ENST00000588009 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
TUBD1-208ENST00000588009 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
TUBD1-208ENST00000588009 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
TUBD1-208ENST00000588009 SMYD5Q6GMV2 418 aa11.03□□□□□ -0.64
TUBD1-208ENST00000588009 ARIH1Q9Y4X5 557 aaPredicted RBP11.03□□□□□ -0.64
TUBD1-208ENST00000588009 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
TUBD1-208ENST00000588009 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
TUBD1-208ENST00000588009 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
TUBD1-208ENST00000588009 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
TUBD1-208ENST00000588009 CAMK2BQ13554 666 aa11□□□□□ -0.65
TUBD1-208ENST00000588009 ZMYND10O75800 440 aa10.98□□□□□ -0.65
TUBD1-208ENST00000588009 NEUROD2Q15784 382 aa10.98□□□□□ -0.65
TUBD1-208ENST00000588009 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
TUBD1-208ENST00000588009 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
TUBD1-208ENST00000588009 L3MBTL3Q96JM7 780 aaPredicted RBP10.94□□□□□ -0.66
TUBD1-208ENST00000588009 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
TUBD1-208ENST00000588009 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
TUBD1-208ENST00000588009 SNPHO15079 494 aa10.92□□□□□ -0.66
TUBD1-208ENST00000588009 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
TUBD1-208ENST00000588009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.9□□□□□ -0.66
TUBD1-208ENST00000588009 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
TUBD1-208ENST00000588009 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
TUBD1-208ENST00000588009 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
TUBD1-208ENST00000588009 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
TUBD1-208ENST00000588009 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
TUBD1-208ENST00000588009 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
TUBD1-208ENST00000588009 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
TUBD1-208ENST00000588009 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
TUBD1-208ENST00000588009 G3V3G9 751 aa10.84□□□□□ -0.67
TUBD1-208ENST00000588009 GPIHBP1Q8IV16 184 aa10.83□□□□□ -0.68
TUBD1-208ENST00000588009 AK7Q96M32 723 aa10.83□□□□□ -0.68
TUBD1-208ENST00000588009 TMEM121BQ9BXQ6 578 aaPredicted RBP10.82□□□□□ -0.68
TUBD1-208ENST00000588009 SPDYE16A6NNV3 312 aaPredicted RBP10.81□□□□□ -0.68
TUBD1-208ENST00000588009 EMILIN3Q9NT22 766 aa10.81□□□□□ -0.68
TUBD1-208ENST00000588009 DPYSL4O14531 572 aa10.8□□□□□ -0.68
TUBD1-208ENST00000588009 ST18O60284 1047 aa10.8□□□□□ -0.68
TUBD1-208ENST00000588009 KRI1Q8N9T8 703 aaKnown RBP10.8□□□□□ -0.68
TUBD1-208ENST00000588009 ARXQ96QS3 562 aa10.8□□□□□ -0.68
TUBD1-208ENST00000588009 DSG2Q14126 1118 aa10.79□□□□□ -0.68
TUBD1-208ENST00000588009 DPY19L2Q6NUT2 758 aa10.79□□□□□ -0.68
TUBD1-208ENST00000588009 PDIA6Q15084 440 aa10.77□□□□□ -0.69
TUBD1-208ENST00000588009 MICALL2Q8IY33 904 aa10.76□□□□□ -0.69
TUBD1-208ENST00000588009 FOXK1P85037 733 aa10.75□□□□□ -0.69
TUBD1-208ENST00000588009 TMC2Q8TDI7 906 aa10.75□□□□□ -0.69
TUBD1-208ENST00000588009 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
TUBD1-208ENST00000588009 GPBP1L1Q9HC44 474 aaPredicted RBP10.74□□□□□ -0.69
TUBD1-208ENST00000588009 BOLA1Q9Y3E2 137 aa10.74□□□□□ -0.69
TUBD1-208ENST00000588009 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
TUBD1-208ENST00000588009 TRIM66O15016 1216 aa10.71□□□□□ -0.69
TUBD1-208ENST00000588009 PLPP6Q8IY26 295 aa10.71□□□□□ -0.69
TUBD1-208ENST00000588009 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
TUBD1-208ENST00000588009 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
TUBD1-208ENST00000588009 PDE4DQ08499 809 aa10.68□□□□□ -0.7
TUBD1-208ENST00000588009 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
TUBD1-208ENST00000588009 GPR37O15354 613 aa10.67□□□□□ -0.7
TUBD1-208ENST00000588009 KIF3CO14782 793 aa10.65□□□□□ -0.7
TUBD1-208ENST00000588009 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
TUBD1-208ENST00000588009 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
TUBD1-208ENST00000588009 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
TUBD1-208ENST00000588009 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
TUBD1-208ENST00000588009 SUPT5HO00267 1087 aaKnown RBP10.62□□□□□ -0.71
TUBD1-208ENST00000588009 HOMEZQ8IX15 550 aa10.62□□□□□ -0.71
TUBD1-208ENST00000588009 EMP3P54852 163 aa10.61□□□□□ -0.71
TUBD1-208ENST00000588009 OSBPP22059 807 aa10.59□□□□□ -0.71
TUBD1-208ENST00000588009 DOK7Q18PE1 504 aa10.59□□□□□ -0.71
TUBD1-208ENST00000588009 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
TUBD1-208ENST00000588009 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
TUBD1-208ENST00000588009 ZNF710Q8N1W2 664 aa10.58□□□□□ -0.72
TUBD1-208ENST00000588009 IRF6O14896 467 aa10.57□□□□□ -0.72
TUBD1-208ENST00000588009 PTGER2P43116 358 aa10.57□□□□□ -0.72
TUBD1-208ENST00000588009 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
TUBD1-208ENST00000588009 OXER1Q8TDS5 423 aa10.57□□□□□ -0.72
TUBD1-208ENST00000588009 UPF1Q92900 1129 aaKnown RBP eCLIP10.57□□□□□ -0.72
TUBD1-208ENST00000588009 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
TUBD1-208ENST00000588009 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
TUBD1-208ENST00000588009 GNPATO15228 680 aa10.55□□□□□ -0.72
TUBD1-208ENST00000588009 FCHSD2O94868 740 aa10.53□□□□□ -0.72
TUBD1-208ENST00000588009 AMHR2Q16671 573 aa10.53□□□□□ -0.72
TUBD1-208ENST00000588009 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
TUBD1-208ENST00000588009 TBC1D12O60347 775 aa10.52□□□□□ -0.73
TUBD1-208ENST00000588009 HIC1Q14526 733 aa10.52□□□□□ -0.73
TUBD1-208ENST00000588009 DDX12PQ92771 950 aa10.52□□□□□ -0.73
TUBD1-208ENST00000588009 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms