RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 CAMK2BQ13554 666 aa13.35□□□□□ -0.27
TOM1L1-216ENST00000573607 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
TOM1L1-216ENST00000573607 PLCG2P16885 1265 aa13.34□□□□□ -0.27
TOM1L1-216ENST00000573607 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
TOM1L1-216ENST00000573607 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
TOM1L1-216ENST00000573607 BOLA1Q9Y3E2 137 aa13.34□□□□□ -0.27
TOM1L1-216ENST00000573607 DSG2Q14126 1118 aa13.33□□□□□ -0.28
TOM1L1-216ENST00000573607 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.28
TOM1L1-216ENST00000573607 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
TOM1L1-216ENST00000573607 TESPA1A2RU30 521 aaPredicted RBP13.3□□□□□ -0.28
TOM1L1-216ENST00000573607 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
TOM1L1-216ENST00000573607 ARIH1Q9Y4X5 557 aaPredicted RBP13.28□□□□□ -0.28
TOM1L1-216ENST00000573607 POTEFA5A3E0 1075 aa13.27□□□□□ -0.29
TOM1L1-216ENST00000573607 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
TOM1L1-216ENST00000573607 SEC24BO95487 1268 aa13.27□□□□□ -0.29
TOM1L1-216ENST00000573607 POTEIP0CG38 1075 aa13.27□□□□□ -0.29
TOM1L1-216ENST00000573607 EMILIN3Q9NT22 766 aa13.27□□□□□ -0.29
TOM1L1-216ENST00000573607 G3V3G9 751 aa13.26□□□□□ -0.29
TOM1L1-216ENST00000573607 FOXK1P85037 733 aa13.25□□□□□ -0.29
TOM1L1-216ENST00000573607 KIF3CO14782 793 aa13.24□□□□□ -0.29
TOM1L1-216ENST00000573607 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
TOM1L1-216ENST00000573607 PLPP6Q8IY26 295 aa13.23□□□□□ -0.29
TOM1L1-216ENST00000573607 DPYSL4O14531 572 aa13.22□□□□□ -0.29
TOM1L1-216ENST00000573607 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
TOM1L1-216ENST00000573607 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
TOM1L1-216ENST00000573607 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
TOM1L1-216ENST00000573607 MLLT3P42568 568 aaPredicted RBP13.19□□□□□ -0.3
TOM1L1-216ENST00000573607 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
TOM1L1-216ENST00000573607 C7P10643 843 aa13.17□□□□□ -0.3
TOM1L1-216ENST00000573607 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
TOM1L1-216ENST00000573607 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
TOM1L1-216ENST00000573607 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
TOM1L1-216ENST00000573607 RBM26Q5T8P6 1007 aaKnown RBP13.11□□□□□ -0.31
TOM1L1-216ENST00000573607 PDIA6Q15084 440 aa13.1□□□□□ -0.31
TOM1L1-216ENST00000573607 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
TOM1L1-216ENST00000573607 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
TOM1L1-216ENST00000573607 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
TOM1L1-216ENST00000573607 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
TOM1L1-216ENST00000573607 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
TOM1L1-216ENST00000573607 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
TOM1L1-216ENST00000573607 ZMYND10O75800 440 aa13.01□□□□□ -0.33
TOM1L1-216ENST00000573607 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
TOM1L1-216ENST00000573607 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
TOM1L1-216ENST00000573607 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
TOM1L1-216ENST00000573607 DDX12PQ92771 950 aa12.94□□□□□ -0.34
TOM1L1-216ENST00000573607 EVI5O60447 810 aa12.93□□□□□ -0.34
TOM1L1-216ENST00000573607 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
TOM1L1-216ENST00000573607 TBC1D12O60347 775 aa12.91□□□□□ -0.34
TOM1L1-216ENST00000573607 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
TOM1L1-216ENST00000573607 OSBPP22059 807 aa12.91□□□□□ -0.34
TOM1L1-216ENST00000573607 BRPF1P55201 1214 aaPredicted RBP12.91□□□□□ -0.34
TOM1L1-216ENST00000573607 PTCD2Q8WV60 388 aaKnown RBP12.91□□□□□ -0.34
TOM1L1-216ENST00000573607 GPR37O15354 613 aa12.89□□□□□ -0.35
TOM1L1-216ENST00000573607 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
TOM1L1-216ENST00000573607 PTGER2P43116 358 aa12.88□□□□□ -0.35
TOM1L1-216ENST00000573607 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
TOM1L1-216ENST00000573607 SLC34A2O95436 690 aa12.87□□□□□ -0.35
TOM1L1-216ENST00000573607 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
TOM1L1-216ENST00000573607 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
TOM1L1-216ENST00000573607 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
TOM1L1-216ENST00000573607 ANO8Q9HCE9 1232 aaPredicted RBP12.82□□□□□ -0.36
TOM1L1-216ENST00000573607 PCDHGA4Q9Y5G9 962 aa12.82□□□□□ -0.36
TOM1L1-216ENST00000573607 AK7Q96M32 723 aa12.8□□□□□ -0.36
TOM1L1-216ENST00000573607 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
TOM1L1-216ENST00000573607 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.37
TOM1L1-216ENST00000573607 FECHP22830 423 aa12.76□□□□□ -0.37
TOM1L1-216ENST00000573607 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
TOM1L1-216ENST00000573607 KDM4FA0A1W2PPD8 638 aa12.74□□□□□ -0.37
TOM1L1-216ENST00000573607 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
TOM1L1-216ENST00000573607 TRIM66O15016 1216 aa12.73□□□□□ -0.37
TOM1L1-216ENST00000573607 CDHR5Q9HBB8 845 aa12.73□□□□□ -0.37
TOM1L1-216ENST00000573607 GPBP1L1Q9HC44 474 aaPredicted RBP12.73□□□□□ -0.37
TOM1L1-216ENST00000573607 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
TOM1L1-216ENST00000573607 FCHSD2O94868 740 aa12.72□□□□□ -0.37
TOM1L1-216ENST00000573607 PHF14O94880 888 aa12.72□□□□□ -0.37
TOM1L1-216ENST00000573607 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
TOM1L1-216ENST00000573607 RBM33Q96EV2 1170 aaKnown RBP12.72□□□□□ -0.37
TOM1L1-216ENST00000573607 GNPATO15228 680 aa12.71□□□□□ -0.37
TOM1L1-216ENST00000573607 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
TOM1L1-216ENST00000573607 PTGDRQ13258 359 aa12.7□□□□□ -0.38
TOM1L1-216ENST00000573607 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
TOM1L1-216ENST00000573607 HIC1Q14526 733 aa12.69□□□□□ -0.38
TOM1L1-216ENST00000573607 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
TOM1L1-216ENST00000573607 MINK1Q8N4C8 1332 aaPredicted RBP12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 MAP3K7O43318 606 aa12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 NUDT7P0C024 238 aa12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 PDE4DQ08499 809 aa12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 EPAS1Q99814 870 aa12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 GTF3C3Q9Y5Q9 886 aa12.68□□□□□ -0.38
TOM1L1-216ENST00000573607 IRF6O14896 467 aa12.67□□□□□ -0.38
TOM1L1-216ENST00000573607 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
TOM1L1-216ENST00000573607 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
TOM1L1-216ENST00000573607 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
TOM1L1-216ENST00000573607 TYW1BQ6NUM6 668 aa12.65□□□□□ -0.38
TOM1L1-216ENST00000573607 GPR153Q6NV75 609 aa12.64□□□□□ -0.39
TOM1L1-216ENST00000573607 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
TOM1L1-216ENST00000573607 FOSBP53539 338 aa12.63□□□□□ -0.39
TOM1L1-216ENST00000573607 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms