RNA–Protein interactions for RNA: ENST00000567801.2

LINC01544-201, Transcript of long intergenic non-protein coding RNA 1544, humanhuman

TSL 2 BASIC

Gene LINC01544, Length 5,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01544-201ENST00000567801 SKOR2Q2VWA4 1001 aaPredicted RBP15.35■□□□□ 0.05
LINC01544-201ENST00000567801 CHMP4BQ9H444 224 aaKnown RBP15.34■□□□□ 0.05
LINC01544-201ENST00000567801 FRAT1Q92837 279 aaPredicted RBP15.33■□□□□ 0.04
LINC01544-201ENST00000567801 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
LINC01544-201ENST00000567801 SETQ01105 290 aaPredicted RBP15.32■□□□□ 0.04
LINC01544-201ENST00000567801 GOLGA6L4A6NEF3 574 aa15.32■□□□□ 0.04
LINC01544-201ENST00000567801 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
LINC01544-201ENST00000567801 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
LINC01544-201ENST00000567801 SLC4A3P48751 1232 aa15.29■□□□□ 0.04
LINC01544-201ENST00000567801 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
LINC01544-201ENST00000567801 KDM2AQ9Y2K7 1162 aa15.29■□□□□ 0.04
LINC01544-201ENST00000567801 CCDC66A2RUB6 948 aa15.27■□□□□ 0.03
LINC01544-201ENST00000567801 KIF27Q86VH2 1401 aa15.27■□□□□ 0.03
LINC01544-201ENST00000567801 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
LINC01544-201ENST00000567801 MRE11P49959 708 aa15.26■□□□□ 0.03
LINC01544-201ENST00000567801 PHF14O94880 888 aa15.25■□□□□ 0.03
LINC01544-201ENST00000567801 HTATSF1O43719 755 aaKnown RBP15.25■□□□□ 0.03
LINC01544-201ENST00000567801 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
LINC01544-201ENST00000567801 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
LINC01544-201ENST00000567801 PDE4CQ08493 712 aa15.24■□□□□ 0.03
LINC01544-201ENST00000567801 CALRP27797 417 aaKnown RBP15.24■□□□□ 0.03
LINC01544-201ENST00000567801 ZMYND15Q9H091 742 aa15.24■□□□□ 0.03
LINC01544-201ENST00000567801 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
LINC01544-201ENST00000567801 MCCP23508 829 aa15.23■□□□□ 0.03
LINC01544-201ENST00000567801 TEX35Q5T0J7 233 aa15.22■□□□□ 0.03
LINC01544-201ENST00000567801 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
LINC01544-201ENST00000567801 CFAP53Q96M91 514 aa15.22■□□□□ 0.03
LINC01544-201ENST00000567801 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
LINC01544-201ENST00000567801 R3HCC1Q9Y3T6 440 aaKnown RBP15.21■□□□□ 0.03
LINC01544-201ENST00000567801 DDX49Q9Y6V7 483 aaKnown RBP15.2■□□□□ 0.02
LINC01544-201ENST00000567801 PPP1R15AO75807 674 aaPredicted RBP15.2■□□□□ 0.02
LINC01544-201ENST00000567801 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
LINC01544-201ENST00000567801 CENPQQ7L2Z9 268 aaPredicted RBP15.2■□□□□ 0.02
LINC01544-201ENST00000567801 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
LINC01544-201ENST00000567801 CFDP1Q9UEE9 299 aaPredicted RBP15.2■□□□□ 0.02
LINC01544-201ENST00000567801 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
LINC01544-201ENST00000567801 NOM1Q5C9Z4 860 aaKnown RBP15.2■□□□□ 0.02
LINC01544-201ENST00000567801 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
LINC01544-201ENST00000567801 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
LINC01544-201ENST00000567801 TAF3Q5VWG9 929 aa15.19■□□□□ 0.02
LINC01544-201ENST00000567801 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
LINC01544-201ENST00000567801 CARD11Q9BXL7 1154 aa15.19■□□□□ 0.02
LINC01544-201ENST00000567801 ZBED9Q6R2W3 1325 aa15.18■□□□□ 0.02
LINC01544-201ENST00000567801 CCNB3Q8WWL7 1395 aa15.17■□□□□ 0.02
LINC01544-201ENST00000567801 GPS2Q13227 327 aa15.17■□□□□ 0.02
LINC01544-201ENST00000567801 CHMP5Q9NZZ3 219 aa15.16■□□□□ 0.02
LINC01544-201ENST00000567801 MSH5O43196 834 aa15.15■□□□□ 0.02
LINC01544-201ENST00000567801 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
LINC01544-201ENST00000567801 RBM10P98175 930 aaKnown RBP15.13■□□□□ 0.01
LINC01544-201ENST00000567801 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
LINC01544-201ENST00000567801 DIAPH3Q9NSV4 1193 aa15.12■□□□□ 0.01
LINC01544-201ENST00000567801 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
LINC01544-201ENST00000567801 RRP1P56182 461 aaKnown RBP15.12■□□□□ 0.01
LINC01544-201ENST00000567801 RALBP1Q15311 655 aa15.12■□□□□ 0.01
LINC01544-201ENST00000567801 CEP164Q9UPV0 1460 aa15.11■□□□□ 0.01
LINC01544-201ENST00000567801 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
LINC01544-201ENST00000567801 CC2D1BQ5T0F9 858 aaKnown RBP15.11■□□□□ 0.01
LINC01544-201ENST00000567801 TPM4P67936 248 aa15.1■□□□□ 0.01
LINC01544-201ENST00000567801 C14orf37Q86TY3 774 aa15.1■□□□□ 0.01
LINC01544-201ENST00000567801 EXOC6Q8TAG9 804 aa15.1■□□□□ 0.01
LINC01544-201ENST00000567801 MROH2BQ7Z745 1585 aa15.1■□□□□ 0.01
LINC01544-201ENST00000567801 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
LINC01544-201ENST00000567801 CWC15Q9P013 229 aaKnown RBP15.1■□□□□ 0.01
LINC01544-201ENST00000567801 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
LINC01544-201ENST00000567801 PDCL3Q9H2J4 239 aa15.1■□□□□ 0.01
LINC01544-201ENST00000567801 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
LINC01544-201ENST00000567801 ISY1Q9ULR0 285 aaKnown RBP15.09■□□□□ 0.01
LINC01544-201ENST00000567801 KTN1Q86UP2 1357 aaKnown RBP15.09■□□□□ 0.01
LINC01544-201ENST00000567801 KIF16BQ96L93 1317 aa15.09■□□□□ 0.01
LINC01544-201ENST00000567801 NOC3LQ8WTT2 800 aaKnown RBP15.08■□□□□ 0
LINC01544-201ENST00000567801 NASPP49321 788 aaPredicted RBP15.08■□□□□ 0
LINC01544-201ENST00000567801 CCDC173Q0VFZ6 552 aa15.08■□□□□ 0
LINC01544-201ENST00000567801 FOXD4L1Q9NU39 408 aa15.08■□□□□ 0
LINC01544-201ENST00000567801 KIAA1211Q6ZU35 1233 aa15.07■□□□□ 0
LINC01544-201ENST00000567801 FRAT2O75474 233 aaPredicted RBP15.07■□□□□ 0
LINC01544-201ENST00000567801 KCNJ4P48050 445 aa15.05■□□□□ -0
LINC01544-201ENST00000567801 FGD1P98174 961 aa15.05■□□□□ -0
LINC01544-201ENST00000567801 ESPNB1AK53 854 aa15.04■□□□□ -0
LINC01544-201ENST00000567801 ST18O60284 1047 aa15.04■□□□□ -0
LINC01544-201ENST00000567801 ARGLU1Q9NWB6 273 aaPredicted RBP15.03■□□□□ -0
LINC01544-201ENST00000567801 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
LINC01544-201ENST00000567801 TRAK2O60296 914 aa15.03■□□□□ -0
LINC01544-201ENST00000567801 A0A0G2JS52 829 aa15.02□□□□□ -0.01
LINC01544-201ENST00000567801 IPO8O15397 1037 aaKnown RBP15.02□□□□□ -0.01
LINC01544-201ENST00000567801 PLEKHG5O94827 1062 aa15.02□□□□□ -0.01
LINC01544-201ENST00000567801 SOGA1O94964 1423 aa15.01□□□□□ -0.01
LINC01544-201ENST00000567801 ZNF592Q92610 1267 aa15.01□□□□□ -0.01
LINC01544-201ENST00000567801 UQCRHLA0A096LP55 91 aa15.01□□□□□ -0.01
LINC01544-201ENST00000567801 UQCRHP07919 91 aa15.01□□□□□ -0.01
LINC01544-201ENST00000567801 CUX2O14529 1486 aa15.01□□□□□ -0.01
LINC01544-201ENST00000567801 TSPYL1Q9H0U9 437 aa15□□□□□ -0.01
LINC01544-201ENST00000567801 PHLDB1Q86UU1 1377 aa15□□□□□ -0.01
LINC01544-201ENST00000567801 GOLGA2Q08379 1002 aa15□□□□□ -0.01
LINC01544-201ENST00000567801 RAB3GAP2Q9H2M9 1393 aa15□□□□□ -0.01
LINC01544-201ENST00000567801 CRBNQ96SW2 442 aa14.99□□□□□ -0.01
LINC01544-201ENST00000567801 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
LINC01544-201ENST00000567801 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
LINC01544-201ENST00000567801 TPM3P06753 285 aa14.98□□□□□ -0.01
LINC01544-201ENST00000567801 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
LINC01544-201ENST00000567801 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms