RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
CHD9-205ENST00000562785 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
CHD9-205ENST00000562785 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
CHD9-205ENST00000562785 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
CHD9-205ENST00000562785 PPP1R15BQ5SWA1 713 aa12.44□□□□□ -0.42
CHD9-205ENST00000562785 SLC39A7Q92504 469 aa12.41□□□□□ -0.42
CHD9-205ENST00000562785 G3V3G9 751 aa12.4□□□□□ -0.42
CHD9-205ENST00000562785 TMC2Q8TDI7 906 aa12.39□□□□□ -0.43
CHD9-205ENST00000562785 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
CHD9-205ENST00000562785 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
CHD9-205ENST00000562785 SEC24BO95487 1268 aa12.38□□□□□ -0.43
CHD9-205ENST00000562785 FOXK1P85037 733 aa12.38□□□□□ -0.43
CHD9-205ENST00000562785 DSG2Q14126 1118 aa12.38□□□□□ -0.43
CHD9-205ENST00000562785 TESPA1A2RU30 521 aaPredicted RBP12.37□□□□□ -0.43
CHD9-205ENST00000562785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHD9-205ENST00000562785 KIF3CO14782 793 aa12.36□□□□□ -0.43
CHD9-205ENST00000562785 SEMA3EO15041 775 aa12.36□□□□□ -0.43
CHD9-205ENST00000562785 C7P10643 843 aa12.36□□□□□ -0.43
CHD9-205ENST00000562785 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
CHD9-205ENST00000562785 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
CHD9-205ENST00000562785 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
CHD9-205ENST00000562785 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
CHD9-205ENST00000562785 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
CHD9-205ENST00000562785 C2orf72A6NCS6 295 aa12.33□□□□□ -0.44
CHD9-205ENST00000562785 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
CHD9-205ENST00000562785 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
CHD9-205ENST00000562785 PLPP6Q8IY26 295 aa12.29□□□□□ -0.44
CHD9-205ENST00000562785 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
CHD9-205ENST00000562785 DPYSL4O14531 572 aa12.26□□□□□ -0.45
CHD9-205ENST00000562785 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
CHD9-205ENST00000562785 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
CHD9-205ENST00000562785 PDIA6Q15084 440 aa12.24□□□□□ -0.45
CHD9-205ENST00000562785 C3orf67Q6ZVT6 689 aa12.2□□□□□ -0.46
CHD9-205ENST00000562785 MLLT3P42568 568 aaPredicted RBP12.18□□□□□ -0.46
CHD9-205ENST00000562785 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
CHD9-205ENST00000562785 OXER1Q8TDS5 423 aa12.16□□□□□ -0.46
CHD9-205ENST00000562785 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
CHD9-205ENST00000562785 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHD9-205ENST00000562785 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
CHD9-205ENST00000562785 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
CHD9-205ENST00000562785 ZMYND10O75800 440 aa12.08□□□□□ -0.48
CHD9-205ENST00000562785 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
CHD9-205ENST00000562785 SLC34A2O95436 690 aa12.07□□□□□ -0.48
CHD9-205ENST00000562785 GPIHBP1Q8IV16 184 aa12.07□□□□□ -0.48
CHD9-205ENST00000562785 TBC1D12O60347 775 aa12.05□□□□□ -0.48
CHD9-205ENST00000562785 PTGER2P43116 358 aa12.05□□□□□ -0.48
CHD9-205ENST00000562785 GRXCR2A6NFK2 248 aa12.02□□□□□ -0.49
CHD9-205ENST00000562785 EVI5O60447 810 aa12.02□□□□□ -0.49
CHD9-205ENST00000562785 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
CHD9-205ENST00000562785 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
CHD9-205ENST00000562785 SLC24A3Q9HC58 644 aa12□□□□□ -0.49
CHD9-205ENST00000562785 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
CHD9-205ENST00000562785 GPR37O15354 613 aa11.98□□□□□ -0.49
CHD9-205ENST00000562785 OSBPP22059 807 aa11.98□□□□□ -0.49
CHD9-205ENST00000562785 DDX12PQ92771 950 aa11.98□□□□□ -0.49
CHD9-205ENST00000562785 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
CHD9-205ENST00000562785 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
CHD9-205ENST00000562785 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
CHD9-205ENST00000562785 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
CHD9-205ENST00000562785 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
CHD9-205ENST00000562785 PRIM1P49642 420 aaKnown RBP11.9□□□□□ -0.5
CHD9-205ENST00000562785 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
CHD9-205ENST00000562785 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
CHD9-205ENST00000562785 AK7Q96M32 723 aa11.89□□□□□ -0.51
CHD9-205ENST00000562785 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
CHD9-205ENST00000562785 PHF14O94880 888 aa11.88□□□□□ -0.51
CHD9-205ENST00000562785 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
CHD9-205ENST00000562785 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
CHD9-205ENST00000562785 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
CHD9-205ENST00000562785 EPAS1Q99814 870 aa11.87□□□□□ -0.51
CHD9-205ENST00000562785 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
CHD9-205ENST00000562785 FCHSD2O94868 740 aa11.85□□□□□ -0.51
CHD9-205ENST00000562785 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
CHD9-205ENST00000562785 HIC1Q14526 733 aa11.85□□□□□ -0.51
CHD9-205ENST00000562785 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
CHD9-205ENST00000562785 TMEM132AQ24JP5 1023 aa11.85□□□□□ -0.51
CHD9-205ENST00000562785 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
CHD9-205ENST00000562785 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
CHD9-205ENST00000562785 GNPATO15228 680 aa11.83□□□□□ -0.52
CHD9-205ENST00000562785 PTGDRQ13258 359 aa11.83□□□□□ -0.52
CHD9-205ENST00000562785 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
CHD9-205ENST00000562785 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
CHD9-205ENST00000562785 MAP2K5Q13163 448 aa11.82□□□□□ -0.52
CHD9-205ENST00000562785 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
CHD9-205ENST00000562785 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
CHD9-205ENST00000562785 TRIM66O15016 1216 aa11.8□□□□□ -0.52
CHD9-205ENST00000562785 MAP3K7O43318 606 aa11.79□□□□□ -0.52
CHD9-205ENST00000562785 FOSBP53539 338 aa11.79□□□□□ -0.52
CHD9-205ENST00000562785 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
CHD9-205ENST00000562785 FBXW7Q969H0 707 aa11.79□□□□□ -0.52
CHD9-205ENST00000562785 NUDT7P0C024 238 aa11.78□□□□□ -0.52
CHD9-205ENST00000562785 ARSIQ5FYB1 569 aa11.78□□□□□ -0.52
CHD9-205ENST00000562785 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
CHD9-205ENST00000562785 CDHR5Q9HBB8 845 aa11.78□□□□□ -0.52
CHD9-205ENST00000562785 IRF6O14896 467 aa11.77□□□□□ -0.53
CHD9-205ENST00000562785 FECHP22830 423 aa11.77□□□□□ -0.53
CHD9-205ENST00000562785 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHD9-205ENST00000562785 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
CHD9-205ENST00000562785 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
CHD9-205ENST00000562785 PDE4DQ08499 809 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms