RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 AKNAQ7Z591 1439 aa15.87■□□□□ 0.13
GABRB3-213ENST00000557765 CDC42BPAQ5VT25 1732 aa15.87■□□□□ 0.13
GABRB3-213ENST00000557765 EFCAB2Q5VUJ9 269 aa15.86■□□□□ 0.13
GABRB3-213ENST00000557765 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
GABRB3-213ENST00000557765 HRCP23327 699 aa15.85■□□□□ 0.13
GABRB3-213ENST00000557765 ARHGEF5Q12774 1597 aa15.84■□□□□ 0.13
GABRB3-213ENST00000557765 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
GABRB3-213ENST00000557765 SHANK2Q9UPX8 1470 aa15.84■□□□□ 0.13
GABRB3-213ENST00000557765 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
GABRB3-213ENST00000557765 NEO1Q92859 1461 aa15.83■□□□□ 0.12
GABRB3-213ENST00000557765 ROCK1Q13464 1354 aa15.82■□□□□ 0.12
GABRB3-213ENST00000557765 ARHGAP5Q13017 1502 aa15.82■□□□□ 0.12
GABRB3-213ENST00000557765 DNMT1P26358 1616 aaKnown RBP15.81■□□□□ 0.12
GABRB3-213ENST00000557765 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
GABRB3-213ENST00000557765 TEX14Q8IWB6 1497 aa15.81■□□□□ 0.12
GABRB3-213ENST00000557765 PCGF6Q9BYE7 350 aa15.81■□□□□ 0.12
GABRB3-213ENST00000557765 CDC42BPBQ9Y5S2 1711 aa15.8■□□□□ 0.12
GABRB3-213ENST00000557765 CD109Q6YHK3 1445 aa15.8■□□□□ 0.12
GABRB3-213ENST00000557765 KCNH8Q96L42 1107 aa15.79■□□□□ 0.12
GABRB3-213ENST00000557765 MAP3K4Q9Y6R4 1608 aa15.79■□□□□ 0.12
GABRB3-213ENST00000557765 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
GABRB3-213ENST00000557765 DIP2BQ9P265 1576 aa15.78■□□□□ 0.12
GABRB3-213ENST00000557765 FANCAO15360 1455 aa15.78■□□□□ 0.12
GABRB3-213ENST00000557765 CCDC141Q6ZP82 1450 aa15.77■□□□□ 0.11
GABRB3-213ENST00000557765 ADGRL2O95490 1459 aa15.76■□□□□ 0.11
GABRB3-213ENST00000557765 DAPK1P53355 1430 aa15.76■□□□□ 0.11
GABRB3-213ENST00000557765 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
GABRB3-213ENST00000557765 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
GABRB3-213ENST00000557765 HFM1A2PYH4 1435 aa15.75■□□□□ 0.11
GABRB3-213ENST00000557765 RTEL1-TNFRSF6BF6WH68 1400 aa15.75■□□□□ 0.11
GABRB3-213ENST00000557765 MAST1Q9Y2H9 1570 aa15.75■□□□□ 0.11
GABRB3-213ENST00000557765 ABCC1P33527 1531 aa15.74■□□□□ 0.11
GABRB3-213ENST00000557765 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
GABRB3-213ENST00000557765 SAMD9LQ8IVG5 1584 aa15.74■□□□□ 0.11
GABRB3-213ENST00000557765 CROCC2H7BZ55 1655 aa15.72■□□□□ 0.11
GABRB3-213ENST00000557765 ANKRD30AQ9BXX3 1397 aa15.72■□□□□ 0.11
GABRB3-213ENST00000557765 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.11
GABRB3-213ENST00000557765 ABCC5O15440 1437 aa15.71■□□□□ 0.11
GABRB3-213ENST00000557765 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
GABRB3-213ENST00000557765 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
GABRB3-213ENST00000557765 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
GABRB3-213ENST00000557765 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
GABRB3-213ENST00000557765 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
GABRB3-213ENST00000557765 PLXNC1O60486 1568 aa15.67■□□□□ 0.1
GABRB3-213ENST00000557765 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
GABRB3-213ENST00000557765 SYCP2Q9BX26 1530 aa15.67■□□□□ 0.1
GABRB3-213ENST00000557765 NCOA1Q15788 1441 aa15.67■□□□□ 0.1
GABRB3-213ENST00000557765 C9orf84Q5VXU9 1444 aa15.67■□□□□ 0.1
GABRB3-213ENST00000557765 GCC2Q8IWJ2 1684 aa15.66■□□□□ 0.1
GABRB3-213ENST00000557765 MAGI2Q86UL8 1455 aa15.65■□□□□ 0.1
GABRB3-213ENST00000557765 KDM5CP41229 1560 aa15.64■□□□□ 0.09
GABRB3-213ENST00000557765 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
GABRB3-213ENST00000557765 DENND4BO75064 1496 aaPredicted RBP15.64■□□□□ 0.09
GABRB3-213ENST00000557765 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
GABRB3-213ENST00000557765 NAIPQ13075 1403 aa15.63■□□□□ 0.09
GABRB3-213ENST00000557765 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
GABRB3-213ENST00000557765 ZNF644Q9H582 1327 aaPredicted RBP15.63■□□□□ 0.09
GABRB3-213ENST00000557765 KIF13AQ9H1H9 1805 aa15.62■□□□□ 0.09
GABRB3-213ENST00000557765 PTPRKQ15262 1439 aa15.6■□□□□ 0.09
GABRB3-213ENST00000557765 ERBINQ96RT1 1412 aa15.6■□□□□ 0.09
GABRB3-213ENST00000557765 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
GABRB3-213ENST00000557765 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
GABRB3-213ENST00000557765 INO80Q9ULG1 1556 aaPredicted RBP15.59■□□□□ 0.09
GABRB3-213ENST00000557765 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
GABRB3-213ENST00000557765 SPAG9O60271 1321 aaKnown RBP15.59■□□□□ 0.09
GABRB3-213ENST00000557765 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.09
GABRB3-213ENST00000557765 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
GABRB3-213ENST00000557765 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
GABRB3-213ENST00000557765 KIF15Q9NS87 1388 aa15.57■□□□□ 0.08
GABRB3-213ENST00000557765 ANKRD50Q9ULJ7 1429 aa15.57■□□□□ 0.08
GABRB3-213ENST00000557765 ATP7AQ04656 1500 aa15.57■□□□□ 0.08
GABRB3-213ENST00000557765 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
GABRB3-213ENST00000557765 ITGAEP38570 1179 aa15.56■□□□□ 0.08
GABRB3-213ENST00000557765 TRAPPC8Q9Y2L5 1435 aa15.56■□□□□ 0.08
GABRB3-213ENST00000557765 HECW2Q9P2P5 1572 aa15.56■□□□□ 0.08
GABRB3-213ENST00000557765 PPRC1Q5VV67 1664 aaKnown RBP15.56■□□□□ 0.08
GABRB3-213ENST00000557765 EIF2AK4Q9P2K8 1649 aaKnown RBP15.55■□□□□ 0.08
GABRB3-213ENST00000557765 AEBP2Q6ZN18 517 aaPredicted RBP15.55■□□□□ 0.08
GABRB3-213ENST00000557765 REREQ9P2R6 1566 aa15.53■□□□□ 0.08
GABRB3-213ENST00000557765 RICTORQ6R327 1708 aa15.53■□□□□ 0.08
GABRB3-213ENST00000557765 FAM135AQ9P2D6 1515 aa15.52■□□□□ 0.07
GABRB3-213ENST00000557765 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
GABRB3-213ENST00000557765 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
GABRB3-213ENST00000557765 DHX29Q7Z478 1369 aaKnown RBP15.5■□□□□ 0.07
GABRB3-213ENST00000557765 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
GABRB3-213ENST00000557765 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
GABRB3-213ENST00000557765 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
GABRB3-213ENST00000557765 KIDINS220Q9ULH0 1771 aa15.48■□□□□ 0.07
GABRB3-213ENST00000557765 RRP7BPQ9NSQ0 103 aa15.47■□□□□ 0.07
GABRB3-213ENST00000557765 UNC13BO14795 1591 aa15.46■□□□□ 0.07
GABRB3-213ENST00000557765 TIMELESSQ9UNS1 1208 aa15.46■□□□□ 0.07
GABRB3-213ENST00000557765 A2MP01023 1474 aa15.46■□□□□ 0.06
GABRB3-213ENST00000557765 AGLP35573 1532 aa15.45■□□□□ 0.06
GABRB3-213ENST00000557765 KANK1Q14678 1352 aa15.44■□□□□ 0.06
GABRB3-213ENST00000557765 FRMPD1Q5SYB0 1578 aa15.44■□□□□ 0.06
GABRB3-213ENST00000557765 DEPDC5O75140 1603 aa15.43■□□□□ 0.06
GABRB3-213ENST00000557765 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
GABRB3-213ENST00000557765 CCER1Q8TC90 406 aaPredicted RBP15.43■□□□□ 0.06
GABRB3-213ENST00000557765 DHX57Q6P158 1386 aaKnown RBP15.43■□□□□ 0.06
GABRB3-213ENST00000557765 ATP10AO60312 1499 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms