RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 C7P10643 843 aa4.02□□□□□ -1.77
HIF1A-212ENST00000557538 FOXK1P85037 733 aa4.02□□□□□ -1.77
HIF1A-212ENST00000557538 MICALL2Q8IY33 904 aa4.02□□□□□ -1.77
HIF1A-212ENST00000557538 SPDYE16A6NNV3 312 aaPredicted RBP4.01□□□□□ -1.77
HIF1A-212ENST00000557538 DDX27Q96GQ7 796 aaKnown RBP4.01□□□□□ -1.77
HIF1A-212ENST00000557538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4□□□□□ -1.77
HIF1A-212ENST00000557538 BOLA1Q9Y3E2 137 aa4□□□□□ -1.77
HIF1A-212ENST00000557538 SLC34A2O95436 690 aa4□□□□□ -1.77
HIF1A-212ENST00000557538 PTGER2P43116 358 aa4□□□□□ -1.77
HIF1A-212ENST00000557538 POTEFA5A3E0 1075 aa3.99□□□□□ -1.77
HIF1A-212ENST00000557538 PELP1Q8IZL8 1130 aaKnown RBP3.99□□□□□ -1.77
HIF1A-212ENST00000557538 PPP1R15BQ5SWA1 713 aa3.98□□□□□ -1.77
HIF1A-212ENST00000557538 LARP6Q9BRS8 491 aaKnown RBP3.98□□□□□ -1.77
HIF1A-212ENST00000557538 POTEIP0CG38 1075 aa3.98□□□□□ -1.77
HIF1A-212ENST00000557538 PLCG2P16885 1265 aa3.97□□□□□ -1.77
HIF1A-212ENST00000557538 PDIA6Q15084 440 aa3.97□□□□□ -1.77
HIF1A-212ENST00000557538 SMYD5Q6GMV2 418 aa3.97□□□□□ -1.77
HIF1A-212ENST00000557538 DPY19L2Q6NUT2 758 aa3.97□□□□□ -1.77
HIF1A-212ENST00000557538 TMC2Q8TDI7 906 aa3.96□□□□□ -1.78
HIF1A-212ENST00000557538 OXER1Q8TDS5 423 aa3.96□□□□□ -1.78
HIF1A-212ENST00000557538 DSG2Q14126 1118 aa3.95□□□□□ -1.78
HIF1A-212ENST00000557538 PTCD2Q8WV60 388 aaKnown RBP3.95□□□□□ -1.78
HIF1A-212ENST00000557538 ANO8Q9HCE9 1232 aaPredicted RBP3.95□□□□□ -1.78
HIF1A-212ENST00000557538 TULP1O00294 542 aaPredicted RBP3.95□□□□□ -1.78
HIF1A-212ENST00000557538 TPRNQ4KMQ1 711 aa3.95□□□□□ -1.78
HIF1A-212ENST00000557538 DCBLD2Q96PD2 775 aa3.95□□□□□ -1.78
HIF1A-212ENST00000557538 COLQQ9Y215 455 aaPredicted RBP3.94□□□□□ -1.78
HIF1A-212ENST00000557538 EMILIN3Q9NT22 766 aa3.94□□□□□ -1.78
HIF1A-212ENST00000557538 KDM4FA0A1W2PPD8 638 aa3.94□□□□□ -1.78
HIF1A-212ENST00000557538 ZMYND10O75800 440 aa3.93□□□□□ -1.78
HIF1A-212ENST00000557538 LMOD2Q6P5Q4 547 aa3.93□□□□□ -1.78
HIF1A-212ENST00000557538 TMEM92Q6UXU6 159 aa3.93□□□□□ -1.78
HIF1A-212ENST00000557538 METRNQ9UJH8 293 aa3.93□□□□□ -1.78
HIF1A-212ENST00000557538 C2orf72A6NCS6 295 aa3.93□□□□□ -1.78
HIF1A-212ENST00000557538 PLPP6Q8IY26 295 aa3.93□□□□□ -1.78
HIF1A-212ENST00000557538 ZC3H15Q8WU90 426 aaKnown RBP3.92□□□□□ -1.78
HIF1A-212ENST00000557538 G3V3G9 751 aa3.91□□□□□ -1.78
HIF1A-212ENST00000557538 ZSWIM6Q9HCJ5 1215 aa3.91□□□□□ -1.78
HIF1A-212ENST00000557538 SEC24BO95487 1268 aa3.91□□□□□ -1.78
HIF1A-212ENST00000557538 PRKCSHP14314 528 aaPredicted RBP3.91□□□□□ -1.78
HIF1A-212ENST00000557538 BARGINQ6ZT62 677 aa3.91□□□□□ -1.78
HIF1A-212ENST00000557538 SEMA3EO15041 775 aa3.9□□□□□ -1.78
HIF1A-212ENST00000557538 TBC1D12O60347 775 aa3.9□□□□□ -1.78
HIF1A-212ENST00000557538 GPR37O15354 613 aa3.9□□□□□ -1.79
HIF1A-212ENST00000557538 DAXXQ9UER7 740 aaPredicted RBP3.89□□□□□ -1.79
HIF1A-212ENST00000557538 MAMSTRQ6ZN01 415 aa3.89□□□□□ -1.79
HIF1A-212ENST00000557538 EPAS1Q99814 870 aa3.88□□□□□ -1.79
HIF1A-212ENST00000557538 OSBPP22059 807 aa3.88□□□□□ -1.79
HIF1A-212ENST00000557538 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.88□□□□□ -1.79
HIF1A-212ENST00000557538 DPYSL4O14531 572 aa3.87□□□□□ -1.79
HIF1A-212ENST00000557538 PHF14O94880 888 aa3.87□□□□□ -1.79
HIF1A-212ENST00000557538 TMEM132AQ24JP5 1023 aa3.87□□□□□ -1.79
HIF1A-212ENST00000557538 POTEJP0CG39 1038 aa3.86□□□□□ -1.79
HIF1A-212ENST00000557538 C3orf67Q6ZVT6 689 aa3.86□□□□□ -1.79
HIF1A-212ENST00000557538 MLLT3P42568 568 aaPredicted RBP3.86□□□□□ -1.79
HIF1A-212ENST00000557538 MAP3K9P80192 1104 aa3.86□□□□□ -1.79
HIF1A-212ENST00000557538 EVI5O60447 810 aa3.85□□□□□ -1.79
HIF1A-212ENST00000557538 AK7Q96M32 723 aa3.85□□□□□ -1.79
HIF1A-212ENST00000557538 HOXB3P14651 431 aaPredicted RBP3.85□□□□□ -1.79
HIF1A-212ENST00000557538 RBM27Q9P2N5 1060 aaKnown RBP3.85□□□□□ -1.79
HIF1A-212ENST00000557538 PCDHGA4Q9Y5G9 962 aa3.85□□□□□ -1.79
HIF1A-212ENST00000557538 MINK1Q8N4C8 1332 aaPredicted RBP3.84□□□□□ -1.79
HIF1A-212ENST00000557538 GPIHBP1Q8IV16 184 aa3.84□□□□□ -1.79
HIF1A-212ENST00000557538 FBXW7Q969H0 707 aa3.84□□□□□ -1.79
HIF1A-212ENST00000557538 JPH4Q96JJ6 628 aa3.84□□□□□ -1.79
HIF1A-212ENST00000557538 DOK7Q18PE1 504 aa3.84□□□□□ -1.8
HIF1A-212ENST00000557538 TTC13Q8NBP0 860 aa3.84□□□□□ -1.8
HIF1A-212ENST00000557538 ZNF316A6NFI3 1004 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-212ENST00000557538 CERKQ8TCT0 537 aa3.83□□□□□ -1.8
HIF1A-212ENST00000557538 PSDA5PKW4 1024 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-212ENST00000557538 ONECUT3O60422 494 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-212ENST00000557538 FCHSD2O94868 740 aa3.83□□□□□ -1.8
HIF1A-212ENST00000557538 EN1Q05925 392 aaPredicted RBP3.83□□□□□ -1.8
HIF1A-212ENST00000557538 MAP2K5Q13163 448 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 AMHR2Q16671 573 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 PTGDRQ13258 359 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 RBM26Q5T8P6 1007 aaKnown RBP3.82□□□□□ -1.8
HIF1A-212ENST00000557538 TYW1BQ6NUM6 668 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 GPR153Q6NV75 609 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 POTEB2H3BUK9 544 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 HIC1Q14526 733 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 ERICH6Q7L0X2 663 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 TMUB1Q9BVT8 246 aa3.82□□□□□ -1.8
HIF1A-212ENST00000557538 SNPHO15079 494 aa3.81□□□□□ -1.8
HIF1A-212ENST00000557538 PRIM1P49642 420 aaKnown RBP3.81□□□□□ -1.8
HIF1A-212ENST00000557538 FOSBP53539 338 aa3.81□□□□□ -1.8
HIF1A-212ENST00000557538 BRPF1P55201 1214 aaPredicted RBP3.81□□□□□ -1.8
HIF1A-212ENST00000557538 NPDC1Q9NQX5 325 aaPredicted RBP3.81□□□□□ -1.8
HIF1A-212ENST00000557538 SCUBE2Q9NQ36 999 aa3.8□□□□□ -1.8
HIF1A-212ENST00000557538 TRIM66O15016 1216 aa3.8□□□□□ -1.8
HIF1A-212ENST00000557538 GNPATO15228 680 aa3.8□□□□□ -1.8
HIF1A-212ENST00000557538 IRF6O14896 467 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 RIMBP2O15034 1052 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 LHX8Q68G74 356 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 HOXB1P14653 301 aaPredicted RBP3.79□□□□□ -1.8
HIF1A-212ENST00000557538 SLAIN1Q8ND83 568 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 SLC24A3Q9HC58 644 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 GOPCQ9HD26 462 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 PCDHGA10Q9Y5H3 936 aa3.79□□□□□ -1.8
HIF1A-212ENST00000557538 SLC4A5Q9BY07 1137 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms