RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 AK7Q96M32 723 aa10.32□□□□□ -0.76
NEMF-209ENST00000556074 FAM117AQ9C073 453 aa10.32□□□□□ -0.76
NEMF-209ENST00000556074 SERPINA10Q9UK55 444 aa10.29□□□□□ -0.76
NEMF-209ENST00000556074 CCDC97Q96F63 343 aaPredicted RBP10.28□□□□□ -0.76
NEMF-209ENST00000556074 MSH5O43196 834 aa10.28□□□□□ -0.76
NEMF-209ENST00000556074 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
NEMF-209ENST00000556074 ZNF219Q9P2Y4 722 aaPredicted RBP10.26□□□□□ -0.77
NEMF-209ENST00000556074 PLEKHG3A1L390 1219 aa10.25□□□□□ -0.77
NEMF-209ENST00000556074 TEX2Q8IWB9 1127 aa10.25□□□□□ -0.77
NEMF-209ENST00000556074 ZEB1P37275 1124 aaPredicted RBP10.25□□□□□ -0.77
NEMF-209ENST00000556074 SPATA32Q96LK8 384 aa10.24□□□□□ -0.77
NEMF-209ENST00000556074 NAP1L5Q96NT1 182 aaPredicted RBP10.24□□□□□ -0.77
NEMF-209ENST00000556074 PDE4DQ08499 809 aa10.24□□□□□ -0.77
NEMF-209ENST00000556074 HOXD11P31277 338 aaPredicted RBP10.22□□□□□ -0.77
NEMF-209ENST00000556074 PRDM10Q9NQV6 1147 aa10.22□□□□□ -0.77
NEMF-209ENST00000556074 MYT1LQ9UL68 1186 aa10.22□□□□□ -0.77
NEMF-209ENST00000556074 CANXP27824 592 aaKnown RBP10.21□□□□□ -0.78
NEMF-209ENST00000556074 TRIM66O15016 1216 aa10.2□□□□□ -0.78
NEMF-209ENST00000556074 PROSER2Q86WR7 435 aaPredicted RBP10.2□□□□□ -0.78
NEMF-209ENST00000556074 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
NEMF-209ENST00000556074 LOC102724159A0A0B4J2E5 919 aa10.2□□□□□ -0.78
NEMF-209ENST00000556074 PWP2Q15269 919 aaKnown RBP10.2□□□□□ -0.78
NEMF-209ENST00000556074 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
NEMF-209ENST00000556074 BRD1O95696 1058 aa10.19□□□□□ -0.78
NEMF-209ENST00000556074 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
NEMF-209ENST00000556074 ANKRD13AQ8IZ07 590 aa10.19□□□□□ -0.78
NEMF-209ENST00000556074 STK25O00506 426 aa10.18□□□□□ -0.78
NEMF-209ENST00000556074 NOL8Q76FK4 1167 aaKnown RBP10.17□□□□□ -0.78
NEMF-209ENST00000556074 POM121Q96HA1 1249 aa10.17□□□□□ -0.78
NEMF-209ENST00000556074 RIPOR2Q9Y4F9 1068 aa10.17□□□□□ -0.78
NEMF-209ENST00000556074 MCM6Q14566 821 aa10.16□□□□□ -0.78
NEMF-209ENST00000556074 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
NEMF-209ENST00000556074 KRI1Q8N9T8 703 aaKnown RBP10.14□□□□□ -0.79
NEMF-209ENST00000556074 PLSCR2Q9NRY7 297 aa10.14□□□□□ -0.79
NEMF-209ENST00000556074 SIRT1Q96EB6 747 aa10.13□□□□□ -0.79
NEMF-209ENST00000556074 KIAA1522Q9P206 1035 aaPredicted RBP10.13□□□□□ -0.79
NEMF-209ENST00000556074 MARCH6O60337 910 aa10.12□□□□□ -0.79
NEMF-209ENST00000556074 EXOC8Q8IYI6 725 aa10.12□□□□□ -0.79
NEMF-209ENST00000556074 PLCD4Q9BRC7 762 aa10.12□□□□□ -0.79
NEMF-209ENST00000556074 ZC3H4Q9UPT8 1303 aaKnown RBP10.12□□□□□ -0.79
NEMF-209ENST00000556074 KCNA1Q09470 495 aa10.11□□□□□ -0.79
NEMF-209ENST00000556074 PLEKHD1A6NEE1 506 aa10.11□□□□□ -0.79
NEMF-209ENST00000556074 AAMPQ13685 434 aa10.11□□□□□ -0.79
NEMF-209ENST00000556074 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
NEMF-209ENST00000556074 ANKRD62A6NC57 917 aa10.08□□□□□ -0.8
NEMF-209ENST00000556074 ANAPC15P60006 121 aa10.08□□□□□ -0.8
NEMF-209ENST00000556074 SETQ01105 290 aaPredicted RBP10.08□□□□□ -0.8
NEMF-209ENST00000556074 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
NEMF-209ENST00000556074 MAFGO15525 162 aa10.07□□□□□ -0.8
NEMF-209ENST00000556074 DRC1Q96MC2 740 aa10.07□□□□□ -0.8
NEMF-209ENST00000556074 SND1Q7KZF4 910 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEMF-209ENST00000556074 CNPY4Q8N129 248 aa10.06□□□□□ -0.8
NEMF-209ENST00000556074 RBM47A0AV96 593 aaKnown RBP10.05□□□□□ -0.8
NEMF-209ENST00000556074 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
NEMF-209ENST00000556074 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
NEMF-209ENST00000556074 IVNS1ABPQ9Y6Y0 642 aa10.05□□□□□ -0.8
NEMF-209ENST00000556074 MIER1Q8N108 512 aa10.04□□□□□ -0.8
NEMF-209ENST00000556074 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
NEMF-209ENST00000556074 CENPBP07199 599 aaPredicted RBP10.04□□□□□ -0.8
NEMF-209ENST00000556074 DDRGK1Q96HY6 314 aa10.04□□□□□ -0.8
NEMF-209ENST00000556074 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
NEMF-209ENST00000556074 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
NEMF-209ENST00000556074 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
NEMF-209ENST00000556074 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
NEMF-209ENST00000556074 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
NEMF-209ENST00000556074 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.8
NEMF-209ENST00000556074 SUGT1Q9Y2Z0 365 aa10.02□□□□□ -0.8
NEMF-209ENST00000556074 SREK1Q8WXA9 508 aaKnown RBP10.01□□□□□ -0.81
NEMF-209ENST00000556074 E2F4Q16254 413 aa10.01□□□□□ -0.81
NEMF-209ENST00000556074 PPP1R15AO75807 674 aaPredicted RBP10.01□□□□□ -0.81
NEMF-209ENST00000556074 MYH16Q9H6N6 1097 aa10□□□□□ -0.81
NEMF-209ENST00000556074 TPD52L2O43399 206 aaKnown RBP10□□□□□ -0.81
NEMF-209ENST00000556074 FAM50AQ14320 339 aaKnown RBP9.99□□□□□ -0.81
NEMF-209ENST00000556074 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
NEMF-209ENST00000556074 MICAL1Q8TDZ2 1067 aa9.99□□□□□ -0.81
NEMF-209ENST00000556074 RBM27Q9P2N5 1060 aaKnown RBP9.99□□□□□ -0.81
NEMF-209ENST00000556074 STK24Q9Y6E0 443 aa9.99□□□□□ -0.81
NEMF-209ENST00000556074 SGSM3Q96HU1 749 aa9.99□□□□□ -0.81
NEMF-209ENST00000556074 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
NEMF-209ENST00000556074 GIMAP6Q6P9H5 292 aa9.99□□□□□ -0.81
NEMF-209ENST00000556074 PTMSP20962 102 aa9.98□□□□□ -0.81
NEMF-209ENST00000556074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
NEMF-209ENST00000556074 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
NEMF-209ENST00000556074 STAG3Q9UJ98 1225 aa9.97□□□□□ -0.81
NEMF-209ENST00000556074 ACIN1Q9UKV3 1341 aaKnown RBP9.97□□□□□ -0.81
NEMF-209ENST00000556074 SKIV2LQ15477 1246 aaKnown RBP9.97□□□□□ -0.81
NEMF-209ENST00000556074 TXNDC2Q86VQ3 553 aa9.97□□□□□ -0.81
NEMF-209ENST00000556074 LAS1LQ9Y4W2 734 aaKnown RBP9.96□□□□□ -0.82
NEMF-209ENST00000556074 GPATCH11Q8N954 259 aa9.96□□□□□ -0.82
NEMF-209ENST00000556074 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
NEMF-209ENST00000556074 PPP1R1BQ9UD71 204 aaPredicted RBP9.95□□□□□ -0.82
NEMF-209ENST00000556074 RAB11FIP3O75154 756 aa9.94□□□□□ -0.82
NEMF-209ENST00000556074 FAM43BQ6ZT52 329 aaPredicted RBP9.94□□□□□ -0.82
NEMF-209ENST00000556074 TMTC2Q8N394 836 aa9.94□□□□□ -0.82
NEMF-209ENST00000556074 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
NEMF-209ENST00000556074 TCF3P15923 654 aa9.93□□□□□ -0.82
NEMF-209ENST00000556074 SPTY2D1Q68D10 685 aaPredicted RBP9.93□□□□□ -0.82
NEMF-209ENST00000556074 DNAJC2Q99543 621 aaKnown RBP9.93□□□□□ -0.82
NEMF-209ENST00000556074 FOSBP53539 338 aa9.92□□□□□ -0.82
NEMF-209ENST00000556074 FOXD4L6Q3SYB3 417 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms