RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ITSN2Q9NZM3 1697 aa6.35□□□□□ -1.39
LINC00648-202ENST00000555985 VPS8Q8N3P4 1428 aa6.34□□□□□ -1.39
LINC00648-202ENST00000555985 EHBP1L1Q8N3D4 1523 aa6.34□□□□□ -1.39
LINC00648-202ENST00000555985 ABCC1P33527 1531 aa6.34□□□□□ -1.4
LINC00648-202ENST00000555985 FANCAO15360 1455 aa6.33□□□□□ -1.4
LINC00648-202ENST00000555985 ARHGEF40Q8TER5 1519 aa6.33□□□□□ -1.4
LINC00648-202ENST00000555985 SAMD9LQ8IVG5 1584 aa6.33□□□□□ -1.4
LINC00648-202ENST00000555985 DMRT2Q9Y5R5 561 aa6.33□□□□□ -1.4
LINC00648-202ENST00000555985 AKNAQ7Z591 1439 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 LOC105371045A0A1W2PR82 267 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 RANGAP1P46060 587 aaPredicted RBP6.32□□□□□ -1.4
LINC00648-202ENST00000555985 ARHGEF12Q9NZN5 1544 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 PLEKHD1A6NEE1 506 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 CNKSR2Q8WXI2 1034 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 EHMT2Q96KQ7 1210 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 REREQ9P2R6 1566 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 GPATCH8Q9UKJ3 1502 aaKnown RBP6.32□□□□□ -1.4
LINC00648-202ENST00000555985 POGZQ7Z3K3 1410 aa6.32□□□□□ -1.4
LINC00648-202ENST00000555985 ARID3CA6NKF2 412 aa6.31□□□□□ -1.4
LINC00648-202ENST00000555985 MAPK8IP2Q13387 824 aaPredicted RBP6.31□□□□□ -1.4
LINC00648-202ENST00000555985 NCBP3Q53F19 620 aaKnown RBP6.31□□□□□ -1.4
LINC00648-202ENST00000555985 SUPT6HQ7KZ85 1726 aaKnown RBP6.31□□□□□ -1.4
LINC00648-202ENST00000555985 KCNH8Q96L42 1107 aa6.31□□□□□ -1.4
LINC00648-202ENST00000555985 ADAMTSL3P82987 1691 aa6.31□□□□□ -1.4
LINC00648-202ENST00000555985 LRRC9Q6ZRR7 1453 aa6.3□□□□□ -1.4
LINC00648-202ENST00000555985 MAGI2Q86UL8 1455 aa6.3□□□□□ -1.4
LINC00648-202ENST00000555985 SLC24A1O60721 1099 aa6.3□□□□□ -1.4
LINC00648-202ENST00000555985 INO80Q9ULG1 1556 aaPredicted RBP6.3□□□□□ -1.4
LINC00648-202ENST00000555985 KIDINS220Q9ULH0 1771 aa6.29□□□□□ -1.4
LINC00648-202ENST00000555985 DENND4BO75064 1496 aaPredicted RBP6.29□□□□□ -1.4
LINC00648-202ENST00000555985 BCORL1Q5H9F3 1711 aa6.29□□□□□ -1.4
LINC00648-202ENST00000555985 CACNB1Q02641 598 aaPredicted RBP6.29□□□□□ -1.4
LINC00648-202ENST00000555985 ABCA6Q8N139 1617 aa6.29□□□□□ -1.4
LINC00648-202ENST00000555985 ADGRL1O94910 1474 aa6.29□□□□□ -1.4
LINC00648-202ENST00000555985 HECW2Q9P2P5 1572 aa6.29□□□□□ -1.4
LINC00648-202ENST00000555985 ARHGAP5Q13017 1502 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 DIP2CQ9Y2E4 1556 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 KIAA1107Q9UPP5 1409 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 CDK11AQ9UQ88 783 aaPredicted RBP6.28□□□□□ -1.4
LINC00648-202ENST00000555985 NCOA2Q15596 1464 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 MBD5Q9P267 1494 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 MLH3Q9UHC1 1453 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 ZFYVE16Q7Z3T8 1539 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 PLXNC1O60486 1568 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 ZNF518AQ6AHZ1 1483 aa6.28□□□□□ -1.4
LINC00648-202ENST00000555985 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
LINC00648-202ENST00000555985 SYCP2Q9BX26 1530 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 KCNA4P22459 653 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 SCAPERQ9BY12 1400 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 MAST1Q9Y2H9 1570 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 CROCC2H7BZ55 1655 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 ADGBQ8N7X0 1667 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 KDM4FA0A1W2PPD8 638 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 TRAPPC8Q9Y2L5 1435 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 AGLP35573 1532 aa6.26□□□□□ -1.41
LINC00648-202ENST00000555985 YEATS2Q9ULM3 1422 aa6.25□□□□□ -1.41
LINC00648-202ENST00000555985 PLEKHH2Q8IVE3 1493 aa6.25□□□□□ -1.41
LINC00648-202ENST00000555985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.24□□□□□ -1.41
LINC00648-202ENST00000555985 RAPGEF3O95398 923 aa6.24□□□□□ -1.41
LINC00648-202ENST00000555985 HNRNPUL2Q1KMD3 747 aaKnown RBP6.24□□□□□ -1.41
LINC00648-202ENST00000555985 TCOF1Q13428 1488 aaKnown RBP6.24□□□□□ -1.41
LINC00648-202ENST00000555985 EFCAB2Q5VUJ9 269 aa6.24□□□□□ -1.41
LINC00648-202ENST00000555985 CAMSAP2Q08AD1 1489 aa6.24□□□□□ -1.41
LINC00648-202ENST00000555985 PELP1Q8IZL8 1130 aaKnown RBP6.24□□□□□ -1.41
LINC00648-202ENST00000555985 MTUS2Q5JR59 1369 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 MIA2Q96PC5 1412 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 ATP10AO60312 1499 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 C9orf84Q5VXU9 1444 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 ATP7AQ04656 1500 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 MADDQ8WXG6 1647 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 KANK4Q5T7N3 995 aaPredicted RBP6.23□□□□□ -1.41
LINC00648-202ENST00000555985 RTEL1-TNFRSF6BF6WH68 1400 aa6.23□□□□□ -1.41
LINC00648-202ENST00000555985 CCNB3Q8WWL7 1395 aa6.22□□□□□ -1.41
LINC00648-202ENST00000555985 MYOM3Q5VTT5 1437 aa6.22□□□□□ -1.41
LINC00648-202ENST00000555985 RNF216Q9NWF9 866 aaPredicted RBP6.22□□□□□ -1.41
LINC00648-202ENST00000555985 FER1L4A9Z1Z3 1794 aa6.22□□□□□ -1.41
LINC00648-202ENST00000555985 MROH2AA6NES4 1674 aa6.21□□□□□ -1.41
LINC00648-202ENST00000555985 DNMT1P26358 1616 aaKnown RBP6.21□□□□□ -1.41
LINC00648-202ENST00000555985 PTPN23Q9H3S7 1636 aa6.21□□□□□ -1.41
LINC00648-202ENST00000555985 HOXD11P31277 338 aaPredicted RBP6.21□□□□□ -1.41
LINC00648-202ENST00000555985 ATP1B4Q9UN42 357 aaPredicted RBP6.21□□□□□ -1.42
LINC00648-202ENST00000555985 CCDC141Q6ZP82 1450 aa6.2□□□□□ -1.42
LINC00648-202ENST00000555985 SHANK2Q9UPX8 1470 aa6.2□□□□□ -1.42
LINC00648-202ENST00000555985 RNF17Q9BXT8 1623 aaKnown RBP6.2□□□□□ -1.42
LINC00648-202ENST00000555985 EIF2AK4Q9P2K8 1649 aaKnown RBP6.2□□□□□ -1.42
LINC00648-202ENST00000555985 NPM3O75607 178 aaKnown RBP6.2□□□□□ -1.42
LINC00648-202ENST00000555985 RIMS1Q86UR5 1692 aaKnown RBP6.2□□□□□ -1.42
LINC00648-202ENST00000555985 FAM135AQ9P2D6 1515 aa6.19□□□□□ -1.42
LINC00648-202ENST00000555985 AFAP1Q8N556 730 aa6.19□□□□□ -1.42
LINC00648-202ENST00000555985 MROH1Q8NDA8 1641 aa6.19□□□□□ -1.42
LINC00648-202ENST00000555985 ZNF644Q9H582 1327 aaPredicted RBP6.19□□□□□ -1.42
LINC00648-202ENST00000555985 PTPRMP28827 1452 aa6.19□□□□□ -1.42
LINC00648-202ENST00000555985 DEPDC5O75140 1603 aa6.19□□□□□ -1.42
LINC00648-202ENST00000555985 FGD6Q6ZV73 1430 aa6.19□□□□□ -1.42
LINC00648-202ENST00000555985 C3P01024 1663 aa6.18□□□□□ -1.42
LINC00648-202ENST00000555985 CFDP1Q9UEE9 299 aaPredicted RBP6.17□□□□□ -1.42
LINC00648-202ENST00000555985 ADGRL2O95490 1459 aa6.17□□□□□ -1.42
LINC00648-202ENST00000555985 A2MP01023 1474 aa6.17□□□□□ -1.42
LINC00648-202ENST00000555985 ABCC5O15440 1437 aa6.17□□□□□ -1.42
LINC00648-202ENST00000555985 HNRNPMP52272 730 aaKnown RBP eCLIP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms