RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
KTN1-222ENST00000555506 VARS2Q5ST30 1063 aaKnown RBP10.72□□□□□ -0.69
KTN1-222ENST00000555506 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
KTN1-222ENST00000555506 STK25O00506 426 aa10.69□□□□□ -0.7
KTN1-222ENST00000555506 ZNF687Q8N1G0 1237 aa10.68□□□□□ -0.7
KTN1-222ENST00000555506 STK24Q9Y6E0 443 aa10.68□□□□□ -0.7
KTN1-222ENST00000555506 EFCAB3Q8N7B9 438 aa10.68□□□□□ -0.7
KTN1-222ENST00000555506 DCAF8L2P0C7V8 631 aa10.64□□□□□ -0.71
KTN1-222ENST00000555506 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
KTN1-222ENST00000555506 CHGAP10645 457 aaKnown RBP10.63□□□□□ -0.71
KTN1-222ENST00000555506 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
KTN1-222ENST00000555506 ZSWIM6Q9HCJ5 1215 aa10.61□□□□□ -0.71
KTN1-222ENST00000555506 ILDR1Q86SU0 546 aaPredicted RBP10.61□□□□□ -0.71
KTN1-222ENST00000555506 ANKRD13DQ6ZTN6 518 aa10.6□□□□□ -0.71
KTN1-222ENST00000555506 SOX12O15370 315 aa10.58□□□□□ -0.72
KTN1-222ENST00000555506 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
KTN1-222ENST00000555506 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
KTN1-222ENST00000555506 MFRPQ9BY79 579 aa10.55□□□□□ -0.72
KTN1-222ENST00000555506 IRX2Q9BZI1 471 aaPredicted RBP10.55□□□□□ -0.72
KTN1-222ENST00000555506 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
KTN1-222ENST00000555506 HCSTQ9UBK5 93 aa10.54□□□□□ -0.72
KTN1-222ENST00000555506 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
KTN1-222ENST00000555506 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
KTN1-222ENST00000555506 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
KTN1-222ENST00000555506 NLRP6P59044 892 aa10.5□□□□□ -0.73
KTN1-222ENST00000555506 RGS20O76081 388 aa10.49□□□□□ -0.73
KTN1-222ENST00000555506 PLCB2Q00722 1185 aa10.49□□□□□ -0.73
KTN1-222ENST00000555506 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.73
KTN1-222ENST00000555506 GPR153Q6NV75 609 aa10.42□□□□□ -0.74
KTN1-222ENST00000555506 PPP1R37O75864 691 aa10.42□□□□□ -0.74
KTN1-222ENST00000555506 MICALL2Q8IY33 904 aa10.4□□□□□ -0.74
KTN1-222ENST00000555506 GTPBP6O43824 516 aaPredicted RBP10.39□□□□□ -0.75
KTN1-222ENST00000555506 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
KTN1-222ENST00000555506 PBX2P40425 430 aa10.38□□□□□ -0.75
KTN1-222ENST00000555506 ZNF316A6NFI3 1004 aaPredicted RBP10.36□□□□□ -0.75
KTN1-222ENST00000555506 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
KTN1-222ENST00000555506 RYDENQ9NUL5 291 aaKnown RBP10.33□□□□□ -0.76
KTN1-222ENST00000555506 HAP1P54257 671 aaPredicted RBP10.31□□□□□ -0.76
KTN1-222ENST00000555506 TMEM92Q6UXU6 159 aa10.31□□□□□ -0.76
KTN1-222ENST00000555506 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
KTN1-222ENST00000555506 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
KTN1-222ENST00000555506 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
KTN1-222ENST00000555506 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
KTN1-222ENST00000555506 KIF3CO14782 793 aa10.22□□□□□ -0.77
KTN1-222ENST00000555506 Q6ZNB5 142 aa10.22□□□□□ -0.77
KTN1-222ENST00000555506 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
KTN1-222ENST00000555506 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
KTN1-222ENST00000555506 ADGRD1Q6QNK2 874 aa10.19□□□□□ -0.78
KTN1-222ENST00000555506 VSIG10Q8N0Z9 540 aa10.19□□□□□ -0.78
KTN1-222ENST00000555506 STAC3Q96MF2 364 aa10.18□□□□□ -0.78
KTN1-222ENST00000555506 CADPS2Q86UW7 1296 aa10.17□□□□□ -0.78
KTN1-222ENST00000555506 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
KTN1-222ENST00000555506 KHSRPQ92945 711 aaKnown RBP eCLIP10.17□□□□□ -0.789e-9■■■■■ 27.2
KTN1-222ENST00000555506 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
KTN1-222ENST00000555506 NCKAP5LQ9HCH0 1330 aa10.15□□□□□ -0.78
KTN1-222ENST00000555506 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
KTN1-222ENST00000555506 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
KTN1-222ENST00000555506 ARHGAP33O14559 1287 aa10.13□□□□□ -0.79
KTN1-222ENST00000555506 TK2O00142 265 aa10.12□□□□□ -0.79
KTN1-222ENST00000555506 A0A0G2JS52 829 aa10.1□□□□□ -0.79
KTN1-222ENST00000555506 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
KTN1-222ENST00000555506 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
KTN1-222ENST00000555506 NUDT7P0C024 238 aa10.1□□□□□ -0.79
KTN1-222ENST00000555506 FOXK1P85037 733 aa10.1□□□□□ -0.79
KTN1-222ENST00000555506 DSG2Q14126 1118 aa10.1□□□□□ -0.79
KTN1-222ENST00000555506 PDE4AP27815 886 aa10.09□□□□□ -0.79
KTN1-222ENST00000555506 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
KTN1-222ENST00000555506 LHX6Q9UPM6 363 aa10.09□□□□□ -0.79
KTN1-222ENST00000555506 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
KTN1-222ENST00000555506 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
KTN1-222ENST00000555506 BCANQ96GW7 911 aa10.06□□□□□ -0.8
KTN1-222ENST00000555506 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
KTN1-222ENST00000555506 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
KTN1-222ENST00000555506 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
KTN1-222ENST00000555506 MFSD10Q14728 455 aa10.04□□□□□ -0.8
KTN1-222ENST00000555506 DDX27Q96GQ7 796 aaKnown RBP10.04□□□□□ -0.8
KTN1-222ENST00000555506 HRO43593 1189 aa10.03□□□□□ -0.8
KTN1-222ENST00000555506 SLC34A2O95436 690 aa10□□□□□ -0.81
KTN1-222ENST00000555506 PTPN5P54829 565 aa9.99□□□□□ -0.81
KTN1-222ENST00000555506 PCDHGA4Q9Y5G9 962 aa9.98□□□□□ -0.81
KTN1-222ENST00000555506 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
KTN1-222ENST00000555506 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
KTN1-222ENST00000555506 PTCD2Q8WV60 388 aaKnown RBP9.96□□□□□ -0.82
KTN1-222ENST00000555506 LCE2BO14633 110 aa9.95□□□□□ -0.82
KTN1-222ENST00000555506 LAPTM4AQ15012 233 aa9.94□□□□□ -0.82
KTN1-222ENST00000555506 OXER1Q8TDS5 423 aa9.94□□□□□ -0.82
KTN1-222ENST00000555506 UPF1Q92900 1129 aaKnown RBP eCLIP9.94□□□□□ -0.82
KTN1-222ENST00000555506 LOC100996750A0A140TA64 210 aa9.93□□□□□ -0.82
KTN1-222ENST00000555506 KRTAP4-6Q9BYQ5 205 aa9.93□□□□□ -0.82
KTN1-222ENST00000555506 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
KTN1-222ENST00000555506 DMRTA1Q5VZB9 504 aa9.92□□□□□ -0.82
KTN1-222ENST00000555506 CAMK2BQ13554 666 aa9.91□□□□□ -0.82
KTN1-222ENST00000555506 KDM4FA0A1W2PPD8 638 aa9.9□□□□□ -0.83
KTN1-222ENST00000555506 PSEN2P49810 448 aa9.9□□□□□ -0.83
KTN1-222ENST00000555506 WDR70Q9NW82 654 aa9.9□□□□□ -0.83
KTN1-222ENST00000555506 PPP4R3BQ5MIZ7 849 aa9.88□□□□□ -0.83
KTN1-222ENST00000555506 TBC1D12O60347 775 aa9.87□□□□□ -0.83
KTN1-222ENST00000555506 GOLGA8CPA6NN73 597 aa9.85□□□□□ -0.83
KTN1-222ENST00000555506 E2F4Q16254 413 aa9.85□□□□□ -0.83
KTN1-222ENST00000555506 MAP3K9P80192 1104 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms