RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 ZMYND10O75800 440 aa10.69□□□□□ -0.7
PPFIA2-226ENST00000552020 MAMSTRQ6ZN01 415 aa10.69□□□□□ -0.7
PPFIA2-226ENST00000552020 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
PPFIA2-226ENST00000552020 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
PPFIA2-226ENST00000552020 FBXO22Q8NEZ5 403 aa10.68□□□□□ -0.7
PPFIA2-226ENST00000552020 LARP6Q9BRS8 491 aaKnown RBP10.68□□□□□ -0.7
PPFIA2-226ENST00000552020 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
PPFIA2-226ENST00000552020 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
PPFIA2-226ENST00000552020 TIE1P35590 1138 aa10.67□□□□□ -0.7
PPFIA2-226ENST00000552020 SOX12O15370 315 aa10.65□□□□□ -0.7
PPFIA2-226ENST00000552020 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.7
PPFIA2-226ENST00000552020 NCKAP5LQ9HCH0 1330 aa10.63□□□□□ -0.71
PPFIA2-226ENST00000552020 SEC24BO95487 1268 aa10.63□□□□□ -0.71
PPFIA2-226ENST00000552020 PDE4AP27815 886 aa10.63□□□□□ -0.71
PPFIA2-226ENST00000552020 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
PPFIA2-226ENST00000552020 TTLL13PA6NNM8 815 aa10.61□□□□□ -0.71
PPFIA2-226ENST00000552020 POTEJP0CG39 1038 aa10.61□□□□□ -0.71
PPFIA2-226ENST00000552020 IFNL1Q8IU54 200 aa10.61□□□□□ -0.71
PPFIA2-226ENST00000552020 KRI1Q8N9T8 703 aaKnown RBP10.61□□□□□ -0.71
PPFIA2-226ENST00000552020 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
PPFIA2-226ENST00000552020 POTEMA6NI47 508 aa10.6□□□□□ -0.71
PPFIA2-226ENST00000552020 AK7Q96M32 723 aa10.6□□□□□ -0.71
PPFIA2-226ENST00000552020 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
PPFIA2-226ENST00000552020 DDX27Q96GQ7 796 aaKnown RBP10.59□□□□□ -0.71
PPFIA2-226ENST00000552020 MFSD10Q14728 455 aa10.57□□□□□ -0.72
PPFIA2-226ENST00000552020 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
PPFIA2-226ENST00000552020 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
PPFIA2-226ENST00000552020 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
PPFIA2-226ENST00000552020 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
PPFIA2-226ENST00000552020 POTEFA5A3E0 1075 aa10.54□□□□□ -0.72
PPFIA2-226ENST00000552020 FAM163AQ96GL9 167 aaPredicted RBP10.54□□□□□ -0.72
PPFIA2-226ENST00000552020 CRISPLD2Q9H0B8 497 aa10.54□□□□□ -0.72
PPFIA2-226ENST00000552020 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
PPFIA2-226ENST00000552020 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
PPFIA2-226ENST00000552020 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
PPFIA2-226ENST00000552020 KDM4CQ9H3R0 1056 aa10.52□□□□□ -0.73
PPFIA2-226ENST00000552020 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
PPFIA2-226ENST00000552020 ARIH1Q9Y4X5 557 aaPredicted RBP10.52□□□□□ -0.73
PPFIA2-226ENST00000552020 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
PPFIA2-226ENST00000552020 GOLGA2Q08379 1002 aa10.51□□□□□ -0.73
PPFIA2-226ENST00000552020 IER5LQ5T953 404 aa10.51□□□□□ -0.73
PPFIA2-226ENST00000552020 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
PPFIA2-226ENST00000552020 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
PPFIA2-226ENST00000552020 RSPH6AQ9H0K4 717 aa10.5□□□□□ -0.73
PPFIA2-226ENST00000552020 CAMK2BQ13554 666 aa10.48□□□□□ -0.73
PPFIA2-226ENST00000552020 PDE4DQ08499 809 aa10.46□□□□□ -0.73
PPFIA2-226ENST00000552020 TRIM66O15016 1216 aa10.45□□□□□ -0.74
PPFIA2-226ENST00000552020 PLCG2P16885 1265 aa10.45□□□□□ -0.74
PPFIA2-226ENST00000552020 ARID3AQ99856 593 aa10.45□□□□□ -0.74
PPFIA2-226ENST00000552020 PPP1R15BQ5SWA1 713 aa10.43□□□□□ -0.74
PPFIA2-226ENST00000552020 PCDH10Q9P2E7 1040 aa10.42□□□□□ -0.74
PPFIA2-226ENST00000552020 DPYSL4O14531 572 aa10.4□□□□□ -0.74
PPFIA2-226ENST00000552020 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
PPFIA2-226ENST00000552020 MKRN3Q13064 507 aaKnown RBP10.39□□□□□ -0.75
PPFIA2-226ENST00000552020 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
PPFIA2-226ENST00000552020 ZNF316A6NFI3 1004 aaPredicted RBP10.37□□□□□ -0.75
PPFIA2-226ENST00000552020 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
PPFIA2-226ENST00000552020 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
PPFIA2-226ENST00000552020 SPDYE16A6NNV3 312 aaPredicted RBP10.35□□□□□ -0.75
PPFIA2-226ENST00000552020 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
PPFIA2-226ENST00000552020 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
PPFIA2-226ENST00000552020 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
PPFIA2-226ENST00000552020 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
PPFIA2-226ENST00000552020 EMILIN3Q9NT22 766 aa10.33□□□□□ -0.76
PPFIA2-226ENST00000552020 PDIA6Q15084 440 aa10.32□□□□□ -0.76
PPFIA2-226ENST00000552020 NUTM2FA1L443 756 aa10.31□□□□□ -0.76
PPFIA2-226ENST00000552020 ARID3CA6NKF2 412 aa10.31□□□□□ -0.76
PPFIA2-226ENST00000552020 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
PPFIA2-226ENST00000552020 GPR37O15354 613 aa10.29□□□□□ -0.76
PPFIA2-226ENST00000552020 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
PPFIA2-226ENST00000552020 C1orf115Q9H7X2 142 aa10.29□□□□□ -0.76
PPFIA2-226ENST00000552020 MINK1Q8N4C8 1332 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-226ENST00000552020 GRXCR2A6NFK2 248 aa10.28□□□□□ -0.76
PPFIA2-226ENST00000552020 DSG2Q14126 1118 aa10.28□□□□□ -0.76
PPFIA2-226ENST00000552020 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.28□□□□□ -0.76
PPFIA2-226ENST00000552020 APBB1O00213 710 aa10.27□□□□□ -0.77
PPFIA2-226ENST00000552020 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
PPFIA2-226ENST00000552020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.77
PPFIA2-226ENST00000552020 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
PPFIA2-226ENST00000552020 FLIIQ13045 1269 aa10.26□□□□□ -0.77
PPFIA2-226ENST00000552020 TMC2Q8TDI7 906 aa10.26□□□□□ -0.77
PPFIA2-226ENST00000552020 ST18O60284 1047 aa10.25□□□□□ -0.77
PPFIA2-226ENST00000552020 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
PPFIA2-226ENST00000552020 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
PPFIA2-226ENST00000552020 SNPHO15079 494 aa10.23□□□□□ -0.77
PPFIA2-226ENST00000552020 TTLL12Q14166 644 aaPredicted RBP10.23□□□□□ -0.77
PPFIA2-226ENST00000552020 IRF6O14896 467 aa10.22□□□□□ -0.77
PPFIA2-226ENST00000552020 AMHR2Q16671 573 aa10.22□□□□□ -0.77
PPFIA2-226ENST00000552020 C3orf67Q6ZVT6 689 aa10.21□□□□□ -0.77
PPFIA2-226ENST00000552020 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
PPFIA2-226ENST00000552020 GNPATO15228 680 aa10.2□□□□□ -0.78
PPFIA2-226ENST00000552020 HRCP23327 699 aa10.2□□□□□ -0.78
PPFIA2-226ENST00000552020 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
PPFIA2-226ENST00000552020 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
PPFIA2-226ENST00000552020 FOXK1P85037 733 aa10.18□□□□□ -0.78
PPFIA2-226ENST00000552020 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
PPFIA2-226ENST00000552020 PDCD7Q8N8D1 485 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-226ENST00000552020 FCHSD2O94868 740 aa10.17□□□□□ -0.78
PPFIA2-226ENST00000552020 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
PPFIA2-226ENST00000552020 HIC1Q14526 733 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms