RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
DEPDC4-205ENST00000548313 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
DEPDC4-205ENST00000548313 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
DEPDC4-205ENST00000548313 TMEM92Q6UXU6 159 aa11.01□□□□□ -0.65
DEPDC4-205ENST00000548313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
DEPDC4-205ENST00000548313 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
DEPDC4-205ENST00000548313 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
DEPDC4-205ENST00000548313 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
DEPDC4-205ENST00000548313 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
DEPDC4-205ENST00000548313 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
DEPDC4-205ENST00000548313 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
DEPDC4-205ENST00000548313 STK25O00506 426 aa10.94□□□□□ -0.66
DEPDC4-205ENST00000548313 NLRP6P59044 892 aa10.94□□□□□ -0.66
DEPDC4-205ENST00000548313 DNAJC5Q9H3Z4 198 aa10.93□□□□□ -0.66
DEPDC4-205ENST00000548313 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
DEPDC4-205ENST00000548313 PTGER2P43116 358 aa10.91□□□□□ -0.66
DEPDC4-205ENST00000548313 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
DEPDC4-205ENST00000548313 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
DEPDC4-205ENST00000548313 ARSIQ5FYB1 569 aa10.89□□□□□ -0.67
DEPDC4-205ENST00000548313 STK24Q9Y6E0 443 aa10.89□□□□□ -0.67
DEPDC4-205ENST00000548313 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
DEPDC4-205ENST00000548313 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
DEPDC4-205ENST00000548313 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
DEPDC4-205ENST00000548313 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
DEPDC4-205ENST00000548313 SPRYD3Q8NCJ5 442 aa10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 KHSRPQ92945 711 aaKnown RBP eCLIP10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 MFRPQ9BY79 579 aa10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
DEPDC4-205ENST00000548313 KIF3CO14782 793 aa10.77□□□□□ -0.69
DEPDC4-205ENST00000548313 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
DEPDC4-205ENST00000548313 C2orf72A6NCS6 295 aa10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 PBX2P40425 430 aa10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 PAXIP1Q6ZW49 1069 aaPredicted RBP10.76□□□□□ -0.69
DEPDC4-205ENST00000548313 SLC34A2O95436 690 aa10.73□□□□□ -0.69
DEPDC4-205ENST00000548313 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
DEPDC4-205ENST00000548313 GTPBP6O43824 516 aaPredicted RBP10.72□□□□□ -0.69
DEPDC4-205ENST00000548313 NUDT7P0C024 238 aa10.72□□□□□ -0.69
DEPDC4-205ENST00000548313 TMC2Q8TDI7 906 aa10.71□□□□□ -0.69
DEPDC4-205ENST00000548313 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
DEPDC4-205ENST00000548313 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
DEPDC4-205ENST00000548313 LHX6Q9UPM6 363 aa10.68□□□□□ -0.7
DEPDC4-205ENST00000548313 PSDA5PKW4 1024 aaPredicted RBP10.66□□□□□ -0.7
DEPDC4-205ENST00000548313 POTEEQ6S8J3 1075 aa10.62□□□□□ -0.71
DEPDC4-205ENST00000548313 AXIN2Q9Y2T1 843 aa10.62□□□□□ -0.71
DEPDC4-205ENST00000548313 ARHGAP33O14559 1287 aa10.61□□□□□ -0.71
DEPDC4-205ENST00000548313 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
DEPDC4-205ENST00000548313 HCSTQ9UBK5 93 aa10.61□□□□□ -0.71
DEPDC4-205ENST00000548313 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
DEPDC4-205ENST00000548313 PPP1R37O75864 691 aa10.56□□□□□ -0.72
DEPDC4-205ENST00000548313 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
DEPDC4-205ENST00000548313 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
DEPDC4-205ENST00000548313 TK2O00142 265 aa10.55□□□□□ -0.72
DEPDC4-205ENST00000548313 TSHZ2Q9NRE2 1034 aa10.54□□□□□ -0.72
DEPDC4-205ENST00000548313 KDM4FA0A1W2PPD8 638 aa10.53□□□□□ -0.72
DEPDC4-205ENST00000548313 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
DEPDC4-205ENST00000548313 TBC1D12O60347 775 aa10.52□□□□□ -0.73
DEPDC4-205ENST00000548313 FOXK1P85037 733 aa10.52□□□□□ -0.73
DEPDC4-205ENST00000548313 PPP4R3BQ5MIZ7 849 aa10.5□□□□□ -0.73
DEPDC4-205ENST00000548313 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
DEPDC4-205ENST00000548313 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
DEPDC4-205ENST00000548313 HRO43593 1189 aa10.48□□□□□ -0.73
DEPDC4-205ENST00000548313 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
DEPDC4-205ENST00000548313 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
DEPDC4-205ENST00000548313 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
DEPDC4-205ENST00000548313 PSEN2P49810 448 aa10.46□□□□□ -0.73
DEPDC4-205ENST00000548313 DSG2Q14126 1118 aa10.44□□□□□ -0.74
DEPDC4-205ENST00000548313 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
DEPDC4-205ENST00000548313 KDM2AQ9Y2K7 1162 aa10.41□□□□□ -0.74
DEPDC4-205ENST00000548313 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
DEPDC4-205ENST00000548313 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
DEPDC4-205ENST00000548313 PDE4AP27815 886 aa10.37□□□□□ -0.75
DEPDC4-205ENST00000548313 OXER1Q8TDS5 423 aa10.35□□□□□ -0.75
DEPDC4-205ENST00000548313 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
DEPDC4-205ENST00000548313 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
DEPDC4-205ENST00000548313 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
DEPDC4-205ENST00000548313 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
DEPDC4-205ENST00000548313 ZNF454Q8N9F8 522 aa10.32□□□□□ -0.76
DEPDC4-205ENST00000548313 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
DEPDC4-205ENST00000548313 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
DEPDC4-205ENST00000548313 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
DEPDC4-205ENST00000548313 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-205ENST00000548313 PTPN5P54829 565 aa10.29□□□□□ -0.76
DEPDC4-205ENST00000548313 MFSD10Q14728 455 aa10.29□□□□□ -0.76
DEPDC4-205ENST00000548313 RGS20O76081 388 aa10.28□□□□□ -0.76
DEPDC4-205ENST00000548313 PTPREP23469 700 aa10.28□□□□□ -0.76
DEPDC4-205ENST00000548313 PPP1R15BQ5SWA1 713 aa10.28□□□□□ -0.76
DEPDC4-205ENST00000548313 FOSBP53539 338 aa10.27□□□□□ -0.77
DEPDC4-205ENST00000548313 IFFO2Q5TF58 517 aa10.27□□□□□ -0.77
DEPDC4-205ENST00000548313 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-205ENST00000548313 GOLGA8CPA6NN73 597 aa10.26□□□□□ -0.77
DEPDC4-205ENST00000548313 BHMG1C9JSJ3 638 aaPredicted RBP10.26□□□□□ -0.77
DEPDC4-205ENST00000548313 THSD4Q6ZMP0 1018 aa10.24□□□□□ -0.77
DEPDC4-205ENST00000548313 ANO8Q9HCE9 1232 aaPredicted RBP10.24□□□□□ -0.77
DEPDC4-205ENST00000548313 P3H3Q8IVL6 736 aa10.23□□□□□ -0.77
DEPDC4-205ENST00000548313 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-205ENST00000548313 JPH4Q96JJ6 628 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms