RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ZRANB1Q9UGI0 708 aa8.81□□□□□ -1
DDB1-219ENST00000541513 MKRN3Q13064 507 aaKnown RBP8.8□□□□□ -1
DDB1-219ENST00000541513 RAD21O60216 631 aa8.78□□□□□ -1
DDB1-219ENST00000541513 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
DDB1-219ENST00000541513 FLIIQ13045 1269 aa8.77□□□□□ -1.01
DDB1-219ENST00000541513 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
DDB1-219ENST00000541513 AK7Q96M32 723 aa8.77□□□□□ -1.01
DDB1-219ENST00000541513 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
DDB1-219ENST00000541513 HSP90B1P14625 803 aaKnown RBP8.76□□□□□ -1.01
DDB1-219ENST00000541513 CADPS2Q86UW7 1296 aa8.75□□□□□ -1.01
DDB1-219ENST00000541513 CCDC82Q8N4S0 544 aa8.75□□□□□ -1.01
DDB1-219ENST00000541513 KDM4CQ9H3R0 1056 aa8.75□□□□□ -1.01
DDB1-219ENST00000541513 SCRIBQ14160 1630 aa8.73□□□□□ -1.01
DDB1-219ENST00000541513 A6NJR5 290 aa8.73□□□□□ -1.01
DDB1-219ENST00000541513 SEMA3EO15041 775 aa8.72□□□□□ -1.01
DDB1-219ENST00000541513 CDK11BP21127 795 aaKnown RBP8.72□□□□□ -1.01
DDB1-219ENST00000541513 CDK11AQ9UQ88 783 aaPredicted RBP8.72□□□□□ -1.01
DDB1-219ENST00000541513 PUS7Q96PZ0 661 aaKnown RBP8.71□□□□□ -1.02
DDB1-219ENST00000541513 BICRAQ9NZM4 1560 aa8.7□□□□□ -1.02
DDB1-219ENST00000541513 SMYD5Q6GMV2 418 aa8.7□□□□□ -1.02
DDB1-219ENST00000541513 TMCO4Q5TGY1 634 aa8.69□□□□□ -1.02
DDB1-219ENST00000541513 PHF12Q96QT6 1004 aa8.69□□□□□ -1.02
DDB1-219ENST00000541513 BCL11BQ9C0K0 894 aaPredicted RBP8.69□□□□□ -1.02
DDB1-219ENST00000541513 MTMR7Q9Y216 660 aa8.69□□□□□ -1.02
DDB1-219ENST00000541513 TRAK2O60296 914 aa8.68□□□□□ -1.02
DDB1-219ENST00000541513 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
DDB1-219ENST00000541513 FAM163AQ96GL9 167 aaPredicted RBP8.68□□□□□ -1.02
DDB1-219ENST00000541513 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
DDB1-219ENST00000541513 CREBZFQ9NS37 354 aa8.66□□□□□ -1.02
DDB1-219ENST00000541513 METRNQ9UJH8 293 aa8.66□□□□□ -1.02
DDB1-219ENST00000541513 MFAP1P55081 439 aaKnown RBP8.65□□□□□ -1.02
DDB1-219ENST00000541513 E2F4Q16254 413 aa8.65□□□□□ -1.02
DDB1-219ENST00000541513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.64□□□□□ -1.03
DDB1-219ENST00000541513 CHRM1P11229 460 aaPredicted RBP8.64□□□□□ -1.03
DDB1-219ENST00000541513 ZFP91Q96JP5 570 aaPredicted RBP8.64□□□□□ -1.03
DDB1-219ENST00000541513 NUBP1P53384 320 aa8.63□□□□□ -1.03
DDB1-219ENST00000541513 PDE4DQ08499 809 aa8.63□□□□□ -1.03
DDB1-219ENST00000541513 TRIM66O15016 1216 aa8.62□□□□□ -1.03
DDB1-219ENST00000541513 ASTLQ6HA08 431 aaPredicted RBP8.62□□□□□ -1.03
DDB1-219ENST00000541513 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
DDB1-219ENST00000541513 RBM25P49756 843 aaKnown RBP8.61□□□□□ -1.03
DDB1-219ENST00000541513 ZNF316A6NFI3 1004 aaPredicted RBP8.58□□□□□ -1.04
DDB1-219ENST00000541513 E9PSI1 815 aa8.58□□□□□ -1.04
DDB1-219ENST00000541513 ATMINO43313 823 aaPredicted RBP8.58□□□□□ -1.04
DDB1-219ENST00000541513 C7P10643 843 aa8.58□□□□□ -1.04
DDB1-219ENST00000541513 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
DDB1-219ENST00000541513 MAMSTRQ6ZN01 415 aa8.58□□□□□ -1.04
DDB1-219ENST00000541513 CDAN1Q8IWY9 1227 aa8.58□□□□□ -1.04
DDB1-219ENST00000541513 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
DDB1-219ENST00000541513 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
DDB1-219ENST00000541513 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
DDB1-219ENST00000541513 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
DDB1-219ENST00000541513 SERPINA10Q9UK55 444 aa8.57□□□□□ -1.04
DDB1-219ENST00000541513 ARIH1Q9Y4X5 557 aaPredicted RBP8.57□□□□□ -1.04
DDB1-219ENST00000541513 DCAF8Q5TAQ9 597 aa8.56□□□□□ -1.04
DDB1-219ENST00000541513 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
DDB1-219ENST00000541513 ZNF428Q96B54 188 aa8.56□□□□□ -1.04
DDB1-219ENST00000541513 GZF1Q9H116 711 aaPredicted RBP8.56□□□□□ -1.04
DDB1-219ENST00000541513 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
DDB1-219ENST00000541513 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
DDB1-219ENST00000541513 KRI1Q8N9T8 703 aaKnown RBP8.55□□□□□ -1.04
DDB1-219ENST00000541513 MS4A3Q96HJ5 214 aa8.54□□□□□ -1.04
DDB1-219ENST00000541513 POTEFA5A3E0 1075 aa8.53□□□□□ -1.04
DDB1-219ENST00000541513 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
DDB1-219ENST00000541513 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.05
DDB1-219ENST00000541513 MNX1P50219 401 aaPredicted RBP8.51□□□□□ -1.05
DDB1-219ENST00000541513 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
DDB1-219ENST00000541513 CCDC97Q96F63 343 aaPredicted RBP8.51□□□□□ -1.05
DDB1-219ENST00000541513 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
DDB1-219ENST00000541513 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
DDB1-219ENST00000541513 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
DDB1-219ENST00000541513 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
DDB1-219ENST00000541513 IRF5Q13568 498 aa8.49□□□□□ -1.05
DDB1-219ENST00000541513 CHMP4AQ9BY43 222 aa8.49□□□□□ -1.05
DDB1-219ENST00000541513 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
DDB1-219ENST00000541513 FNBP4Q8N3X1 1017 aaPredicted RBP8.48□□□□□ -1.05
DDB1-219ENST00000541513 ATN1P54259 1190 aaPredicted RBP8.47□□□□□ -1.05
DDB1-219ENST00000541513 MCM6Q14566 821 aa8.47□□□□□ -1.05
DDB1-219ENST00000541513 RSPH4AQ5TD94 716 aa8.46□□□□□ -1.06
DDB1-219ENST00000541513 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
DDB1-219ENST00000541513 EIF4G1Q04637 1599 aaKnown RBP8.45□□□□□ -1.06
DDB1-219ENST00000541513 PDE4CQ08493 712 aa8.45□□□□□ -1.06
DDB1-219ENST00000541513 MMRN1Q13201 1228 aa8.45□□□□□ -1.06
DDB1-219ENST00000541513 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
DDB1-219ENST00000541513 ZNF777Q9ULD5 760 aaPredicted RBP8.45□□□□□ -1.06
DDB1-219ENST00000541513 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
DDB1-219ENST00000541513 AMHR2Q16671 573 aa8.41□□□□□ -1.06
DDB1-219ENST00000541513 MFSD10Q14728 455 aa8.4□□□□□ -1.06
DDB1-219ENST00000541513 SPNS2Q8IVW8 549 aa8.4□□□□□ -1.06
DDB1-219ENST00000541513 MFRPQ9BY79 579 aa8.4□□□□□ -1.06
DDB1-219ENST00000541513 USP35Q9P2H5 1018 aa8.4□□□□□ -1.06
DDB1-219ENST00000541513 SMARCA4P51532 1647 aa8.4□□□□□ -1.07
DDB1-219ENST00000541513 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.07
DDB1-219ENST00000541513 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
DDB1-219ENST00000541513 CECR2Q9BXF3 1484 aa8.39□□□□□ -1.07
DDB1-219ENST00000541513 KCNA1Q09470 495 aa8.39□□□□□ -1.07
DDB1-219ENST00000541513 CAMK2BQ13554 666 aa8.38□□□□□ -1.07
DDB1-219ENST00000541513 GPR37O15354 613 aa8.37□□□□□ -1.07
DDB1-219ENST00000541513 ST18O60284 1047 aa8.37□□□□□ -1.07
DDB1-219ENST00000541513 PARP9Q8IXQ6 854 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms